Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2418 |
Symbol | |
ID | 5197443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2688473 |
End bp | 2689807 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581964 |
Product | amino acid permease-associated region |
Protein accession | YP_001262915 |
Protein GI | 148555333 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.112494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0680601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCTC CGATCGAGCG CCCGAGCCTG CGCAAGAGCG TCGGGCTGGT CGGCGTCGTC ACCTTCGGGG CGGGTACCGC GATCGGCGTA TCGATCTTCT CGATCCTCCA GCCGACCGCG CAGGTGGCGG GATCGGGGCT GCTCGCGGCG ATCGGCGTCG CGGCGCTGCC GATGCTCGTC TTCGCGGTCG CCTATGCCTA TCTCGGCTCG GCGCTGCCGG TGTCGGGGGC GTCCTACGAA TGGCCGACCC GCTTCATCCA TCCCGGCGTC GGCTTCATCA TCGCCTGGCT GCGCATCGTC TCCAACGTCG GCGCGCTGAC GATCCTGTCG CAGGTGATGA TCAGCTATCT CGGCATGGTC TTCCCGGTGC CGCTCAAGCC CGCCATGGCA CTGGCCATCA CCGCGGTGTT CGCGCTCAAC TATGTCGGCG TGTCGATGGC GGCGAAGGTG CAGGCGCAGC TCATGGCGCT GCTGCTGATC ATCCTCGCCA TCTTCGTCGC GACCGGCCTG CCGCATTTCG ATCCGGTGCT GGTCGGCAAC CCGCTCGACA CGCCGCCGCT CGCGATCCTC GCCGTCGTGC CGCTGATGAT CACCCTGTTC CTGGGGATCG AATCGGCGGT CGAGATCGGC GAGGAGGTGC GCGACGCGCG GCGCAACGTG CCGATCGGCA TCGCGCTGGC GATCGGGCTG ACCGCCCTGG TCTACGGCCT CGTCGCGCTC ACCGCGCTCG GCCTGGTCGG TCCCGCGACG CTCGCCGCCA GCCAGGCCCC GCTGCTCGAC GCGGCGAAGG TGGTGCTGGG CGACCTGGCG GTGCCGCTGA TCGTCGGCGC CGCCTGCTTC TCGATCGTCA AGTCGATGAA CGCGGCGACC CTCACCTTCT CGCGCAGCCT GTTCGCGATG GGCCGCAACG GCGCTCTGCC GCGCGCGATC GGGACGATCC ACCCACGCTT CGGCACGCCG CACCGGGCGA TCCTGCTCGG CTATGCCTGC GCGATGTCGG GGCTGCTGCT GCCGCCGAGC CTCATCTTCC TGCTGCTCGC GGTCAACGTG CCGACGATGC TCAAATATAT GGCCTGCTCC TATTCGGCGA CCGTCGTCGC CCGCCGCCAT CCCGAGCTCC ACATACGGTC GCAGCTCCGC CTGTCGCGCC CGGCGGTGGT GGCGGTCGGC TATGCCGGCG TGGTCTGCGC GCTGCTCGTC GGCGTGTTCG GGGTCGAGGC CGATCCGCGC CCCTATCTGC TGGTCGGCGG CTGGCTGCTC GTCGGGCTCG CCTACTGGTT CCTCAAGGGC CGCCGCGACT GCGCCGACCA AGCCATGCGC GCTTTGGCCG AATAA
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Protein sequence | MTAPIERPSL RKSVGLVGVV TFGAGTAIGV SIFSILQPTA QVAGSGLLAA IGVAALPMLV FAVAYAYLGS ALPVSGASYE WPTRFIHPGV GFIIAWLRIV SNVGALTILS QVMISYLGMV FPVPLKPAMA LAITAVFALN YVGVSMAAKV QAQLMALLLI ILAIFVATGL PHFDPVLVGN PLDTPPLAIL AVVPLMITLF LGIESAVEIG EEVRDARRNV PIGIALAIGL TALVYGLVAL TALGLVGPAT LAASQAPLLD AAKVVLGDLA VPLIVGAACF SIVKSMNAAT LTFSRSLFAM GRNGALPRAI GTIHPRFGTP HRAILLGYAC AMSGLLLPPS LIFLLLAVNV PTMLKYMACS YSATVVARRH PELHIRSQLR LSRPAVVAVG YAGVVCALLV GVFGVEADPR PYLLVGGWLL VGLAYWFLKG RRDCADQAMR ALAE
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