| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2359 |
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| Symbol | |
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| ID | 5199130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2622290 |
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| End bp | 2623288 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640581905 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001262856 |
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| Protein GI | 148555274 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.747939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGAA GCTACAGGCA GCTCGGCCTT GACGAGCGTA TCGAGATTTA CCGTCTGCAT
GCAGACGGTA AATCTTCGCG TGAGATCGGG GATGCGATTG GCCGGCATCA CACGACGGTT
GGCCGTGAAC TCAAGCGTAA TAGCCGGCAG ACCAAGATCT GGCTGGGTGG CTACAACCCG
CGTCGCGCCC ATGAACTGGC CGCCAGGCGG CGGGAATGGG ATTGCCGCTT CAAGCTGGAG
CGCCAGCCGG ACCTGCGAAA GATCGTGGAA AACGGCCTTG CGATGGGAAG CTCTCCCGAA
CAGATCGCAG GCCGACTGAC CCTCTTAAAT GGTCCCACCG TCAGCCATGA GTCAATCTAT
CGGTTCATCT ACCACCGCTC GGCGCAGAAG GATTATTGGC ACCGGCTCCT GCCTCGCCGA
AAGAGTCGGC GCGGACATTT CGGCAAGCGC GGCGGCAGCT CCGCCAGCTT CATCAAGCAG
CGCCGGCCGA TCCAGGAGAG GCCGACCGAA GCCGACACAC GGACCCAGCC AGGCCATTGG
GAAGCCGACT ACATGCTCTT CGCCAAATAT GGCCACAACC TGCTCGTCCT TCATGAACGG
CAGACCCGCT TCACCATCGT CGAAAAATTG CCCCATCGCC GGGCCAGGCT GACCGCATGC
CGGATCGCCG GAAACCTCCG GCATATCCCC CAGCATCTGC GAAAAACTAT CAGCTTCGAC
AACGGCACCG AGTTCGCCGA GCATTATCGG CTGCACCAAT CACTCGGTGT CAGCACCTTC
TTTTGCGATG TCCGAAGCCC TTGGCAAAAG GGCGGCGTCG AAAACACCAT CGGCAGGCTC
CGCCGCCCCC TGCCACGCAA AACCAACCTC GAAACGCTCA CCGCCAAACA GCTGCGCGCG
CACGTCGACC AGCTCAACAA CACACCCAGA AAATGCCTTG GCTTCCTAAC CCCCGCCGAG
GCATTCCTCA AAATCTCAAC CGGTGCACTT CAAACGTGA
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| Protein sequence | MGRSYRQLGL DERIEIYRLH ADGKSSREIG DAIGRHHTTV GRELKRNSRQ TKIWLGGYNP
RRAHELAARR REWDCRFKLE RQPDLRKIVE NGLAMGSSPE QIAGRLTLLN GPTVSHESIY
RFIYHRSAQK DYWHRLLPRR KSRRGHFGKR GGSSASFIKQ RRPIQERPTE ADTRTQPGHW
EADYMLFAKY GHNLLVLHER QTRFTIVEKL PHRRARLTAC RIAGNLRHIP QHLRKTISFD
NGTEFAEHYR LHQSLGVSTF FCDVRSPWQK GGVENTIGRL RRPLPRKTNL ETLTAKQLRA
HVDQLNNTPR KCLGFLTPAE AFLKISTGAL QT
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