| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2254 |
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| Symbol | |
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| ID | 5200991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2509825 |
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| End bp | 2510664 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640581800 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001262751 |
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| Protein GI | 148555169 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.565091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT TTTTATTGCC CCCGGCGAAG CTTTCGCTCC ACCATCTGAC GGCGCTCGAC
GCGTCGCCGG CGGAGCTGGC CGCGATCGCG GGCCGGCTGG GGTGCGACCA TGTCTGCCTG
TTCACCCATG TTCCCGAGGC GATAGCACGA CTCTTCCCCT GCGTGGGCGA GGCGGACGTG
GCGGAGCTGT CGGCGGCGCT CGGGCAGGCC GGCGTGACAT TGTGCAACCT GGAGGTGTTC
CCGCTCGACG CCGATCCCGA CTGGGCCGGC TTCGAACGGG CGCTGGCGGT GGGGCAGGCG
CTCGGCGCGA CGCGCGCGAC CGTCCACATC CACGATCTCG ACGACCGCGC GGGGGCGGCG
GCGCTGGCGC GCTTCTGCGA CCTTGCGGCC GGGTTCGGCA TCGTCGCGGG GCTGGAGTTC
AACGGCTTCT CGGCGGTGCG CACGCTGCCG CAGGCGGCGG CGATCGTGGC GGCGGCGGAC
CGGACCGGCG CCTCGCTGGT GTGCGACATG CTGCATCTGG TGCGGAACGG CGGCGGCCCC
GCCGAGATCG CCGCCGCGCG CGACCGGATC GGCTATCTCC AGATCTGCGA CGGCCCGCGC
GAGCGGGCGC GCGACGAGGC CTGGCACGAG GCGATCCGCG AGCGCGCCCT GCCCGGCGCC
GGCGACTTCC CGCTCGCCGC CGCGCTCGCC GCGCTGCGCC CCGGCACGAT CGTCGACATC
GAGGTGCCGC AGCATGCCGC GCGCAAGGCG GGAGTCCCGC CGCTCGAACG CGCCCGCCGC
GCCGTCGAGG CGGCGCGCAC CCTGATCGCC AACCACCTGC CGCACGAGGC CGCCCGATGA
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| Protein sequence | MNDFLLPPAK LSLHHLTALD ASPAELAAIA GRLGCDHVCL FTHVPEAIAR LFPCVGEADV
AELSAALGQA GVTLCNLEVF PLDADPDWAG FERALAVGQA LGATRATVHI HDLDDRAGAA
ALARFCDLAA GFGIVAGLEF NGFSAVRTLP QAAAIVAAAD RTGASLVCDM LHLVRNGGGP
AEIAAARDRI GYLQICDGPR ERARDEAWHE AIRERALPGA GDFPLAAALA ALRPGTIVDI
EVPQHAARKA GVPPLERARR AVEAARTLIA NHLPHEAAR
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