Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2225 |
Symbol | |
ID | 5199962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2478870 |
End bp | 2479883 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640581771 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001262722 |
Protein GI | 148555140 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.120601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.705003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGACA GTCCGATCCG CGATCATGGC GCCATCGATC CGACGCTCGG GTTGATGCTC GATGACGATG CCCGGACATT CCTGGCCGGC CTGGCGCCCG ATCCGCTGTC CGGCGCCCGG CGCATGCCGC GGATGCGGCC GTCCGACGCG GAGGCGTCGG GCTGGTTCCA GGGCATGACC GTCCGGCCGG GCTTCTCCTT CGTGATGACC GACGTCTATC GGGCGCGGAG CAAGGAGGCG ATGTTCGTCA GCGACGATCA TCTGAAGCTG CACTTCAAGC TCGACGGGCC GAGCGCGATC AGCGGCGCCA GCCGGGAGAA CATGACCGTC GAGCCCGGCG TGATGGCCTT CCTGGTCCAG CCGCCGCGCA CGGTGAAATA TGAGACCGTG CGCGAGGATG CGCGGATGCG CTGCATCACC ATGGTGTGCA GCCGCGAATT CGCCGGGCAG TTCCTGTCGC CCGTCGACGG CGACCTGCCG GCGCCGATCG TCGAATATCT CAAGGGCCCG GTCTCGCGCT TCGCCCATGG CTATATCCCG CTGCCGCCGC AACTCCGCGC GCTGGTCGAG GAGATGATGG CCCTGCAAGG CGATTCGCTC GGCCAGCTCA TGCTGGAGGC CAAGGCGCTC GAGCTGCTCT ACCTGGCGCT CCGGCAATTG TCGGGGACCA GCGCCGCCGC CCCGCGCGAG CGCGATCGCC GCAAGGTCCA GCAATTATGC GCGCTGCTCG ACAGCAAGGA AGGCGGCGCG ATGAACATCG CCCAGCTCTG CCGCGAGATC GCCTGGAACG AGACCCAGAT GATGGAGAGC TTCAAGCAGA TCACCGGCAC GACGATCGCC AGCTATCGCC AGCGGCAGCG CATGGAGCAG GCGCTGCGCC AGCTCCGCAC CACCGAGCTG TCGATCACCG AGATCGCGTT CGACGCCGGC TACGAGCATC CCAGCAATTT CGCCACGGCG TTCAAGCGGA CCTTCGGCTT CTCCCCGCGG GCCGGGCGCG CCAGCCTGAA CTGA
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Protein sequence | MNDSPIRDHG AIDPTLGLML DDDARTFLAG LAPDPLSGAR RMPRMRPSDA EASGWFQGMT VRPGFSFVMT DVYRARSKEA MFVSDDHLKL HFKLDGPSAI SGASRENMTV EPGVMAFLVQ PPRTVKYETV REDARMRCIT MVCSREFAGQ FLSPVDGDLP APIVEYLKGP VSRFAHGYIP LPPQLRALVE EMMALQGDSL GQLMLEAKAL ELLYLALRQL SGTSAAAPRE RDRRKVQQLC ALLDSKEGGA MNIAQLCREI AWNETQMMES FKQITGTTIA SYRQRQRMEQ ALRQLRTTEL SITEIAFDAG YEHPSNFATA FKRTFGFSPR AGRASLN
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