| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2171 |
|---|
| Symbol | |
|---|
| ID | 5197920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2432203 |
|---|
| End bp | 2432757 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640581716 |
|---|
| Product | peptidase M15A |
|---|
| Protein accession | YP_001262668 |
|---|
| Protein GI | 148555086 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0551853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGA TGGATGCCCA GCAATTGCTG GATATGAGCC CCGATGCCGA CTGGCCCGAG
CGGGCGGCGG CCAAGGTGGT GGCGGCGCTG CTCGATCCGG TTGCCCGGCC GGCCCTGCTG
GCCCTGCGCC TGTCGCCGCA CTTCACCCTG CGCGAGCTAA CCGCGAGCGC CACGGCCGAT
GCGCGCGGCC TGGTCAACAT GCCGGACGCG CGGCAGCTTC TCGCGCTTCG CTATCTGTGC
GTCTCGATCC TCGAACCGGT GCGAGCGCGC TTCGGCCCGG TGCGGGTCAC GTCGGGCCTG
CGGCTGTTCA CGCCCGATAG CCAGCACGGC AAGGGCGAGG CGGCCGATTT CGAGGTGCCC
GGCGTCGCGA ACCTGGCCGT GGCGCGGTGG ATCAGGGACA TGCTGCGCTT CGACCAGCTG
ATCCTTGAGG CATGGTCACC CGGCGCCGCC AACGCAGGCT GGGTCCATTG CAGCGCCCGC
CCGGATCGGG CGCGGAAATC CGTGCTGCGG ACCCCCACGG GCAAGGCGCC CTATTTCGCC
GGGCTCCCGG CCTAA
|
|---|
| Protein sequence | MKLMDAQQLL DMSPDADWPE RAAAKVVAAL LDPVARPALL ALRLSPHFTL RELTASATAD
ARGLVNMPDA RQLLALRYLC VSILEPVRAR FGPVRVTSGL RLFTPDSQHG KGEAADFEVP
GVANLAVARW IRDMLRFDQL ILEAWSPGAA NAGWVHCSAR PDRARKSVLR TPTGKAPYFA
GLPA
|
|---|
| |