| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2058 |
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| Symbol | |
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| ID | 5200970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2308675 |
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| End bp | 2309787 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581603 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001262555 |
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| Protein GI | 148554973 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC ACGGCATTTT GGCGAACCTG TATGGCGCGA GCCAGGATCG CCGCCGGCTG
ACGGCGGCGC TGGGCGCGAT CCGGGACGTC ACCGGCGCGC GGACCGTGAC CCTGCAATGG
TTCCGGCGCA CCGACGAGCG GCTGCGGACG ACCGGGTTCG AGACCTGCCT GTCGGTGCCG
TTCATATCGT CCAAGGGCGG TTGGGCCGAT TTCCAGAACC CCCGCATGCT CGCGCTGGTC
AATCCGCCGA GCGACGGGAT CAGCTTCTTC GAGGATTCGG CCTGCCCCGA TTTCCTGCAG
CCCGACCTGC GACGCTGGCA GGCGCGCTTC ATTCCCTTCG GGATCGGTCG CTTCCTGGGC
GCGCGGGTCA ACCTCCGTCC CGATCGCGAA GTCGGCCTCG CGCTTCATGC CCGGCATGGC
GGGCCCGACC TGCCGTCCGA CGCCCGCGAC CTGCTCGCCG GGCTGATGCC CCATGTGCGC
GAGGCGCTGC GGCTGATCGA GCAGGCCGAG GAGAAGGAGT CGGGCGCGCG GGTGATGGCG
AACACCCTCG CGCTGCTCGA ACAGCCGGTC GCCGTGGTGC GGACCGACGG CGAGATCGTC
TATGCCAATG AGGCGGCGCG GCGATTGCTG GCCGAGGCGG GGCTGCTGCC CGCGCGGGGG
CCGGCCGCCG CCGAGGGCGA GCGGAAGATC GCGGCGCTGG TCGGCCATCT GCTCGATCCG
AAGGCGGCGC CGCACGGATG CCGCTTCACC GCGGGCGGGC GCACGCTGTT CGTCCAGCGG
GCCTGGCTGG AGGGAGCCGG GGAGGAGGAC GGCGGCGGGG ACGGCGGGGA CAGGCTGATG
ATGCTGGCCT TCAACGACCA TGGGAAGGCG CTCGACATCT GTCCCGATCG CCTGCGGACC
TGCTTCGACA TCACCCGGTC GGAGGCGGAG CTGCTCGCGG CGCTCTGCGC GGGCAGCGAC
ATCGCCGCCT TCGCCGCCCG GCGCAGGGTG TCGATCCACA CCGCGCGCAC CCAGCTCAAG
CAGCTCATGG CCAAGACCGA CGTGCGCCGT CAGGCCGACC TGGTGCGGAT GGCGCTGGCC
ACGCCGGTGG CGTCGCTGCG CCGCACCCAC TGA
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| Protein sequence | MDDHGILANL YGASQDRRRL TAALGAIRDV TGARTVTLQW FRRTDERLRT TGFETCLSVP
FISSKGGWAD FQNPRMLALV NPPSDGISFF EDSACPDFLQ PDLRRWQARF IPFGIGRFLG
ARVNLRPDRE VGLALHARHG GPDLPSDARD LLAGLMPHVR EALRLIEQAE EKESGARVMA
NTLALLEQPV AVVRTDGEIV YANEAARRLL AEAGLLPARG PAAAEGERKI AALVGHLLDP
KAAPHGCRFT AGGRTLFVQR AWLEGAGEED GGGDGGDRLM MLAFNDHGKA LDICPDRLRT
CFDITRSEAE LLAALCAGSD IAAFAARRRV SIHTARTQLK QLMAKTDVRR QADLVRMALA
TPVASLRRTH
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