Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2023 |
Symbol | |
ID | 5200935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2267193 |
End bp | 2268932 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640581567 |
Product | amidohydrolase 3 |
Protein accession | YP_001262520 |
Protein GI | 148554938 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.730117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACC TGGTCATCCG GAACGGCACC GTCGTCGACG GCAGCGGCGC GCCCGCCATG ACCGCCGACA TCGGCATCGC CGGCGACCGG ATCGCCGCCG TGAGCGCGAC GCCGCTGCCC GCCGGTCGGG AGGAGCTGGA CGCGAGCGGC CTGCTGGTCA CGCCCGGCTT CGTCGACATC CATACCCATT ATGACGGGCA GGCGACGTGG AGCGGCACGC TCTCCCCCTC CTCCGCCCAT GGCGTGACCA CGGTGGTGAT GGGCAATTGC GGCATCGGCT TCGCGCCGTG CCGGCCGGAG GACCGGGACC GGCTGATCAA GCTGATGGAA GGCGTCGAGG ACATTCCGGA GGTCGTGATG GCCGAGGGGC TGCCCTGGAA CTGGGAGAGC TTCCCCGAAT TCCTCGACGC GGTGGCGGCG ATCCCGCACG ACGTCGATAT CGCCGCCTAT GTGCCGCATT CGGCGCTGCG GGTCTATGCG ATGGGCCAGC GCGGCGCCGA TCGCGAACCG GCCAGGAAGG ACGACCTCGA CCGGATGGTG GCGCTGGTCC GCGAAGCCCT TCGCGCGGGC GCGCTGGGCG TCGCGACGTC GCGGACGCTC GTCCATCGCA CGCCGGGCGG CGAGCTGATC CCGTCCCACG ATGCGGCGGA GGACGAGCTC CAGGCGCTGG CCGGGGCGCT GGCGAGCGAG GGGCACGGCG TCTTCCAGAC GGTGATGGAC CTCGACGACG CGACCGCCGA CGAGGATTTC GACCTGCTCC GCCGGATCGC CGAGCGCTCG GGCCGGCCGA TCAGCTTCTC GCTGCTCCAG CCGCTCAACC ATCCCGGCGT CTGGAAACGG ATGCTCGACA AGCTCGACGG CGCGGCCAAG GACGGCGTGC CGATCAGCGC GCAGGTGTTC GGCCGGCCGG TCGGCATGCT GCTGGGGCTG GACCTTTCCT TCCACCCCTT CTCCTTCCAT CCCTCCTATC GGGAGATCGC GTCACTGCCG CTCGCCGAGC GGGTCAAGGC CCTGCGCCGG CCGGAGCGCC GGGCGCGCAT CCTGGCGGAA CGGCCGATCG ACAACGGCCT GCCCTTCCTC GCCCATCTCG CGCGCTACGA GTGGATGTTC GAGCTCGGCG AGCGCCCGGA CTATCAGCCT TCGCTCGACC GGAGCATCGC CGAGATCGCC GCGCGCACGG GCGTCGACGC AAGGGAGATC GCCTATGACA TGCTGCTGGA GCGCGACGGG CGGAACATCA TCCTGCTGCC CCGCGCCAAT TATGGCGACG GCAATCTGGA CGCCGCCCTG ACGATGATGC GCCATCCGCG AACGACGCTC GGGCTCGGCG ACGGCGGCGC GCATTGTGGC GTGATCTGCG ACGCGAGCCT GCCGACCTTC ATGCTGACCT ATTGGGCGCG CGACCGCGCC GCCGACGGCC TGACGATCGA GGAAGCGGTG CGGGCGCTCA CCGCCGAAAC CGCCCAGGCC GTGGGGCTGC GCGATCGCGG CCGGATCGCA CCGGGCTTCA AGGCGGACGT CAACCTGATC GACCATGGCC GGCTCACCCT CCACGCCCCC GAAATGGTGG CGGACCTGCC GGCCGGCGGG CGGCGGCTGC ACCAGCCGGC GACCGGCTAT GTCGCCACCA TCGTCAACGG CCGGGTGACG CGGCGCGACG ATGCCGCGAC GGGCACGCTG CCGGGCCGCC TCGTCCGTGG CGCGCAACCC GCCCCGGTCG AGGATCAGGG GAGCGCATAG
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Protein sequence | MFDLVIRNGT VVDGSGAPAM TADIGIAGDR IAAVSATPLP AGREELDASG LLVTPGFVDI HTHYDGQATW SGTLSPSSAH GVTTVVMGNC GIGFAPCRPE DRDRLIKLME GVEDIPEVVM AEGLPWNWES FPEFLDAVAA IPHDVDIAAY VPHSALRVYA MGQRGADREP ARKDDLDRMV ALVREALRAG ALGVATSRTL VHRTPGGELI PSHDAAEDEL QALAGALASE GHGVFQTVMD LDDATADEDF DLLRRIAERS GRPISFSLLQ PLNHPGVWKR MLDKLDGAAK DGVPISAQVF GRPVGMLLGL DLSFHPFSFH PSYREIASLP LAERVKALRR PERRARILAE RPIDNGLPFL AHLARYEWMF ELGERPDYQP SLDRSIAEIA ARTGVDAREI AYDMLLERDG RNIILLPRAN YGDGNLDAAL TMMRHPRTTL GLGDGGAHCG VICDASLPTF MLTYWARDRA ADGLTIEEAV RALTAETAQA VGLRDRGRIA PGFKADVNLI DHGRLTLHAP EMVADLPAGG RRLHQPATGY VATIVNGRVT RRDDAATGTL PGRLVRGAQP APVEDQGSA
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