| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1909 |
|---|
| Symbol | |
|---|
| ID | 5200982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2139152 |
|---|
| End bp | 2140717 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640581454 |
|---|
| Product | acyl-CoA synthetase |
|---|
| Protein accession | YP_001262407 |
|---|
| Protein GI | 148554825 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCCTCG CCACGTCCGA CGTGAACTAT ACCGACCTGC TCGTGCAGGC GCTGACCCGC
TATCCGGGCC GCGAGGCCTT CGTCGACGGC GATCGGCGGC TCAGCTACGC CCAGACCGCG
GCGCGGATCA GCCAGTTCAT GCAGCTCTTC CACGCCCGTG GCCTGCGGCC CGGCGCGACG
CTCGCCATCC TCACCGTCAA CGTGCCCGAG GCATGGATGG CGCAGATGGC CGCCTGCCTG
CTCGGCGCGA CCTTCACCGG GCTGCATCCG CTCGGTTCGG TCGACGACCA TCTCCACATC
TGCGACGAGC TGGCGGTCGA CATGCTGGTC GTGCATCCGG TCTATCTGGA GCGTGGCCTG
GCGCTCGGGC AGCGGGCGGC GTCGGTCCGC CATATCCTCG CGCTCGGCCC CAGTGGCGAT
GCGGAGGACC TGCTCGCGCT GGCCGATCCC TTCCCGGTCC GCCGCCTGGA GCGGCGCGCC
TGCGGACGGG AGGACGTCCA CTGGGTCGCC TATACCGGCG GCACGACCGG CCGGTCGAAA
GGCGTCGAGA TTCCCGACCG GGCGCTGGTG CACCAGGTGC AGACCGTCAC CACCTCACTG
GGATTGCCCG AGAATCCCCG CTTCCTGGCG GTCGCCCCGA TCTCCCATGC CGGCGTGCTG
CCGATCGTGC CGACCCTGTT CCGGGGCGGG ACGGTGGTGT TCCAGCGCGG CTTCGATCCC
GCGAAATGGC TCGCCTGCGT CGAGGCGGAA CGGATCAACT GGAGCTTCAT CGTCCCGACG
ATGCTCTATT CGCTGCTCGA CCATGGCCGC CCGGAGGACC ATGATCTCTC CTCGCTGGAG
ACGATCATGT ACGGTTCCTC GCCGATGTCC GCCGCCCGGC TCGCCGAAGC GCATGAGGCG
ATGGGGCCGG TGTTCCTGCA GGCCTATGGC CAGAGCGAGT GCGTCTCCTT CGCCACGACC
CTGCGCAAGG ACGAGCATGA CCCGCTGGGC AATCCGCAAT TGCTGCGTTC CTGCGGCCGG
CCGGTGCTCG GCATGCGGGT CGAGGTGCTG GGCGAGGACG GCCGGCCGGT GGCGGCGGGC
GAGGTCGGCG AGATCTGCGT GCGCGGGCCG GGCATCATGA AGGGCTATCA CCGGATGCCC
GAGGAGACCG CGCAGGCGCT GAAGGACGGC TGGCTCCATT CGGGCGATCT CGCCACGGTC
GACGCGGACG GCTTCGTCTA TATCGTCGAT CGCAAGAAGG AGATGATCAT CACCGGCGGC
TTCAACGTCT ATTCGCGCGA GATCGAGGAC GTGATCGCCG AGCTGCCCGA GATATCGGCG
GTGGCCGTGA TTGGCGTGCC CGACGACAAA TGGGGCGAGG CGGTGAAGGC GGTGGTCGTC
GCGCGGCCGG GCGAGCAGGT CGATCCCGCG CGCCTGATCG AGCTGGTTCG CGCGCGCAAG
GGCGCGCACC AGGCGCCCAA GACGGTCGAC ATCGTCGATC GGATGCCGCT GACCGCCGTC
GGCAAGATCG ACAAGAAGGC GCTGCGCGGC CGCTTCTGGG CCGATCAGGA AAGGATGGTC
CATTGA
|
|---|
| Protein sequence | MSLATSDVNY TDLLVQALTR YPGREAFVDG DRRLSYAQTA ARISQFMQLF HARGLRPGAT
LAILTVNVPE AWMAQMAACL LGATFTGLHP LGSVDDHLHI CDELAVDMLV VHPVYLERGL
ALGQRAASVR HILALGPSGD AEDLLALADP FPVRRLERRA CGREDVHWVA YTGGTTGRSK
GVEIPDRALV HQVQTVTTSL GLPENPRFLA VAPISHAGVL PIVPTLFRGG TVVFQRGFDP
AKWLACVEAE RINWSFIVPT MLYSLLDHGR PEDHDLSSLE TIMYGSSPMS AARLAEAHEA
MGPVFLQAYG QSECVSFATT LRKDEHDPLG NPQLLRSCGR PVLGMRVEVL GEDGRPVAAG
EVGEICVRGP GIMKGYHRMP EETAQALKDG WLHSGDLATV DADGFVYIVD RKKEMIITGG
FNVYSREIED VIAELPEISA VAVIGVPDDK WGEAVKAVVV ARPGEQVDPA RLIELVRARK
GAHQAPKTVD IVDRMPLTAV GKIDKKALRG RFWADQERMV H
|
|---|
| |