Gene Swit_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1882 
Symbol 
ID5196440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2108824 
End bp2109288 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID640581427 
ProductMarR family transcriptional regulator 
Protein accessionYP_001262380 
Protein GI148554798 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.64976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG ACCTGCGCCC CCTCGGCGAT CCCGGCTCGG AGGAGTTCCG GGTCGACGCC 
TATCCCTTCT ACCTGCTCAA CCGGGCGGTG AGCCGCTACA ATGTCGTGAT CGAGGCCGAG
CTGCGCGCGA TCGGCATCGA CATCCCGACA TGGCGGGTAT TGATGGTGCT GGGCGAGAAA
GCGCCCCGCC CGATCGCGCA GGTCGCGCGG TCGACGGTGA TCAACATCTC GACCATGGCG
CGGATCGTCG AGCGGATGAC CCGCGCCGGG CTGATCGACA GCCGGCCGAG CAGCGAGGAC
GGCCGGGTGA CCGAGATATT CCTGACCACG ACCGGACAGG AGAAGCTGGC CGCCGCCCGC
GCGGTGACGG CGCCGATCTA TCGCAAGCTG ATCCGCGGTT TCGGCGCCGA GGATTTCGGC
CTGCTGATCG ACATGCTCAA TCGCCTGCAC GACAATCTGG ATTGA
 
Protein sequence
MTKDLRPLGD PGSEEFRVDA YPFYLLNRAV SRYNVVIEAE LRAIGIDIPT WRVLMVLGEK 
APRPIAQVAR STVINISTMA RIVERMTRAG LIDSRPSSED GRVTEIFLTT TGQEKLAAAR
AVTAPIYRKL IRGFGAEDFG LLIDMLNRLH DNLD