Gene Swit_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1840 
Symbol 
ID5197021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2061542 
End bp2062336 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID640581385 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001262338 
Protein GI148554756 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.15718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATG ACAGCTACAA GGAACTGGCG ATCACGCAGG ACGGCAACAT CCTGACGATC 
ACGGTCAACC GGCCCGAAGC GAAGAACGCG ATCAACCAGG GGCTGCACGA GGAATTCTCG
CGCATCTTCG ACGATGTCGA CCGCGACGAC AGCGTCGACG TGGTGATCCT GTCGGGCTCG
GGCGGGGCGT TCTGCGCGGG CGGCGACCTC AAATGGCTGT TGTCGCTGCA CGGCGACGCG
GCCGCGACCA GCGCCGGCAT CCGCCGCGAC CGCAAGATCC AGAACGCGCT GCTCGACCTC
GAAAAGCCGA TCATCGCGAA GGTCGACGGC CCGGCGATCG GGCTGGGCTG CTCGCTCGCG
CTCTATTGCG ACTTCGTCTA TGCGAGCGAG GGCTCGGTGT TCGCCGATCC GCACGTCTCG
ATCGGCCTCG TCGCGGGCGA CGGCGGCGCG GTGATGTGGC CGCAGCTCAT CGGCTATGCG
CGGGCGCGGC GCTACCTGCT GACCGGGGAT GCGATCCCGG CGGCCGAGGC GGCGGAGATC
GGCCTGATCA CCGCGGCGGT CGCGGCCGAG GAGCTCGACG AGACGGTCGC GAAGATGGCG
CGGCGGCTGG CGCGGGGCGC GACCCATTCG ATCAAGTGGA CCAAGGCCTC GATCAACGCC
GGCCTGCGCG TCACCGCCAA TGCGATCATC GACCGCGCCG CCGCGTTCGA GAACGTCACG
CAGCTCCTCG ACGACCACCG CATCGCGCTC GAGGCCTTCG CGGAAAAGCG GAAGCCGGTC
TTCACCGGGC GCTAG
 
Protein sequence
MNYDSYKELA ITQDGNILTI TVNRPEAKNA INQGLHEEFS RIFDDVDRDD SVDVVILSGS 
GGAFCAGGDL KWLLSLHGDA AATSAGIRRD RKIQNALLDL EKPIIAKVDG PAIGLGCSLA
LYCDFVYASE GSVFADPHVS IGLVAGDGGA VMWPQLIGYA RARRYLLTGD AIPAAEAAEI
GLITAAVAAE ELDETVAKMA RRLARGATHS IKWTKASINA GLRVTANAII DRAAAFENVT
QLLDDHRIAL EAFAEKRKPV FTGR