Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1822 |
Symbol | |
ID | 5199369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2039448 |
End bp | 2040377 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640581368 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_001262321 |
Protein GI | 148554739 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA ATGCAAGGAA GCCGGGCGAG CAGGCCCCGA CGATCCCGAA CGTGCCCTTG CTGCGGCGGC TACAGGCCGG GCTCGACGGC TATACCGCGG CCGAGCGCGC GGTGGCCGGG CACATCGTCG CCCATTACGG GACGCTCGCC TTCGAGACGG CGGAGTCGCT CGCGACAAAG GTAGGGGTGA GCGAGATCAC CATCGGCCGC TTCGCCCGCA AGCTGGGCTT CCGCAACTTC AAGGCGCTCA AGAACGAGCT CAAGGACGCC ACCGTCCAGG CGATGCCCTG GCTGATCGGC GAGGAGCTCG CCGAGTTCGT CGAATCGCCG GGCGAGCCGA GCGACCGCGA CGGCAACCGC CAGCGCGAGA TGAACGCGCT GCTCGCGGTC TACCGCCTCG CCGAGACGCC GGGCTGGGCG GCGGCGGCCA GGCTGCTCGC CCAGGCGCGC ACCGTCCAGA TCGCCGGCTT CCAGACCGAA CGGGGGATCG CCACGCTGCT GGCAAACCAC CTCCAGTTCA TGCGCGACGG GGTGCGGCTG GTCGATCTCG GCGCGGGCAA TTATGCCGAC ATATTCGCGA CCGACACCAG CGACACGTGC CTGGTCGTGA TCGATATCCG CCGCTATTCG CGCCAGTCCT ATCTGGTCGC CGAGCAGGCC AGCCAGCAGG GCATTCCGCT GATCGTGCTG ACCGACCTGT TCTGCGACTG GGCGCAGCGC TTCACCCCGC ATGTGCTGGC GGTGCCGACG CAGACGGGGC TGTTCTGGAG CTCGCCGGTG GCGCTGGTCT GCGCCGCCAA CCTGCTCGTC AACGACGTCA TCAAGCTGAT CGGTCCCGGC GTCGAGCAAC GGCTGGAACA GCTCACCCGG CTCCACCAGA GCTTCACCGG CTATGTCGGC CACCAGCCGC CGAGGCCGAA GCTGCCCTGA
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Protein sequence | MTDNARKPGE QAPTIPNVPL LRRLQAGLDG YTAAERAVAG HIVAHYGTLA FETAESLATK VGVSEITIGR FARKLGFRNF KALKNELKDA TVQAMPWLIG EELAEFVESP GEPSDRDGNR QREMNALLAV YRLAETPGWA AAARLLAQAR TVQIAGFQTE RGIATLLANH LQFMRDGVRL VDLGAGNYAD IFATDTSDTC LVVIDIRRYS RQSYLVAEQA SQQGIPLIVL TDLFCDWAQR FTPHVLAVPT QTGLFWSSPV ALVCAANLLV NDVIKLIGPG VEQRLEQLTR LHQSFTGYVG HQPPRPKLP
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