| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1788 |
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| Symbol | |
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| ID | 5200475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2001513 |
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| End bp | 2002607 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581335 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_001262288 |
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| Protein GI | 148554706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC ATAACCACTG CTGCGGGCAT CAGCACCGCC GCGATTTCCT GCGCACCCTG
GCCGTCGCCG CCGGGGGCTC GATCGTGGCC GCCGGCGCCG CCGGGGAAGC GCAGGCCAAG
GCAAAGCCGC AGGCTCCTGC CGCGCCCCGC CCCGGCGCCC GCATCGACAC CCATGCCCAT
CTCTGGCCGG TCGACTATCT CGACTATCTC GAAAAGCATG GCGCGCCGGG CGTCGCCATC
GCCCGCAACA TCCGCGCGAC CGACAGCGAG CAGGACCTGC AGGCGCGCTT CGCGATGATG
GATGCGGCCG GGGTCGCCAA GCAGGTGCTG TCGGCCTCGC CGCAGATCCT GCAGACGCCC
GACGCCGCCG CCTGCGCGAC CGGCGCCAGG ATGATCAACG ACACCTATGC CGACCTGGTG
CGGCGCCACC CCGACCGCTT CCTCGCCTAT GGCGCGGTGC CGCTGCCGCA TGTCGCGGAG
GCGATCGCCG AGGCGCGGCG CTGCATCGAG CAGCTCGGTT TCGCCGGGAT CGCGCTGACC
ACGCTGATCG CGAACCGGAC GATCGCTGAT CCGGCCTATC TTCCCTTCTA TGCCGAGCTC
GATCGCCTCG GCGCGATCCT CTACATCCAC CCCACCGGCT GCGGCACGCT GAGCCCGATG
GTCAACGACT TCCGCCTCGA ATGGGTGGTG GGCGCGCCGT TCGAGGATTC GCTGGCGACG
CTCCAGCTAT TGAAGGCGGA CATCCCGCAC AAATTCCCCA ATATCCGCTT CCACATCGCC
CATCTCGGCG GCGTGGTCGC GTTCCTGATG CAGCGCATCG AGGACAATTA CACCGGCTGG
AAGGCCTTCC CGCGCAGCCC CACCGCCGAA CTGGCGAAGA TGTGGTTCGA CACGGCCAAC
TTCCACGGCC CGGCGCTGCG CTGCATCGCC GAGACCTTCG GCACCGAGCG GCTGATGCTC
GGCAGCGACT TCCCCTATTT CCAGGACGAG CTCTACACCC GCATCGTCAC CTATGTGGAG
AAGAGCGGGC TGCCGGACGC CACCGCCGAA GCGATCCTGA GCGGCAACGC CCACCGGCTC
TACGGCAAGG GCTGA
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| Protein sequence | MDDHNHCCGH QHRRDFLRTL AVAAGGSIVA AGAAGEAQAK AKPQAPAAPR PGARIDTHAH
LWPVDYLDYL EKHGAPGVAI ARNIRATDSE QDLQARFAMM DAAGVAKQVL SASPQILQTP
DAAACATGAR MINDTYADLV RRHPDRFLAY GAVPLPHVAE AIAEARRCIE QLGFAGIALT
TLIANRTIAD PAYLPFYAEL DRLGAILYIH PTGCGTLSPM VNDFRLEWVV GAPFEDSLAT
LQLLKADIPH KFPNIRFHIA HLGGVVAFLM QRIEDNYTGW KAFPRSPTAE LAKMWFDTAN
FHGPALRCIA ETFGTERLML GSDFPYFQDE LYTRIVTYVE KSGLPDATAE AILSGNAHRL
YGKG
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