Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1720 |
Symbol | |
ID | 5197958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1922707 |
End bp | 1922991 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640581268 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001262221 |
Protein GI | 148554639 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCCG CCGATGCGGT CCACGCGCTC GGCGCCGATG CGCCGGGATG CCGGGCGCTG GTGTCGAGCT TCGCCGCCGG GCTGCGCGTC CCGGCCGAGG GCAGCAGCCG GCATGACGAG ATCGAGATAT CGCTGGTGCT GTCCGGCGCG TTCGACCTCG ACAGCGGCGG CGAGGTCGCG CGGCTCGCGG CGGGCGACGT CGTGATCGTG CCGCCGGGGG AGGCGCATTC CTTCCAGGTC GTCGCCGACA CGCGGATTTT CACGGTTACC GTCGCCGCCG GCTGA
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Protein sequence | MLAADAVHAL GADAPGCRAL VSSFAAGLRV PAEGSSRHDE IEISLVLSGA FDLDSGGEVA RLAAGDVVIV PPGEAHSFQV VADTRIFTVT VAAG
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