| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1706 |
|---|
| Symbol | |
|---|
| ID | 5197495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1905040 |
|---|
| End bp | 1906245 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640581254 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262207 |
|---|
| Protein GI | 148554625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.302597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCA TCATCGCGAC GGCGGCCGTG CTGGCCGCCG CAGGGCCCGC TTGCGCCGGG
AAGATCGCGC TCGAACCGCT GATCGACGCC CGTATCCGCT ACGAACATGC CGAGCAGGAC
GGCCTTCCCG ACACGGCCGA TGCCCTGACC CTGCGCCTGC GCGGCGGGGT GCAGGCCGGC
AGCGGGGCCT GGTCCGCGCT GGTCGAGGGA CAAGGAACGC TCGCAGCCGT CGACGATTAT
TTCGACGGAC TGCGGGGCGC CGCGACCCGT CCGCTGGTCG CCGATCCGCA ATCGATCGGG
CTCTATCGCG CCCAGCTCCG CTACAAGAGC AAGGCGCTGA CGCTGACCGC GGGACGCCAG
CGGATCGCGA TCGACGACGA ACGCTTCGTC GGCGCAGTCG GCTTCCGCGA CAACGGCCAG
ACCTTCGACG CGCTGCGCGT CGAATGGACC GGCCTGCCCC GCCTCAAGAT CGACGCCGCC
TATGCCTGGT CGGTGCGCAG CATCTGGGGC ATCGACGGGC GCGGCGCGCG GCAGCAGGCG
GTTTCGGGCG ACAATGTCTT CGTGACGATC GGCTATGCGA CGCCGATCGG CACGCTCGCC
GGCTTCGCCT ATCTGGTCGA CCAGGACGAG GCGGCGGTGC AGGGCTTCGC GCTGTCGAGC
CAGACCTATG GCGCGCGCCT GTCGGGAAGC CGTGCGCTGT CCCGCGCGGT CAGGCTCTCC
TATGTCCTCG GCTATGCCCG GCAGAGCGAC TGGCACCGCA ATCCGAACGC CTATCATGCC
GACTATCATC TGGCCGACGC GACGCTCGAC ATCGCGTCGT TCAAGGTCGA CCTCGGTTAT
GAGCAGCTCG GCGCGAGCCA TGGCGCGGCG CTGACCAGCT TCCAGACGCC GCTGGCCAGC
GGCTTCAAAT TCCAGGGCTG GGCCGACAAA TTCCTGACCA CGCCGCCCGA CGGCGTTCGC
GATATCCATG CCGGCGCGGG CCATGGCTGG AAGAAGGCCG GTGCGTTCGA CCTGATCGCG
ATCGAGGCGA CGTGGCACCG TTTCGACAGC GACCGGCTCG GCCGCCATTA TGGCGACGAG
CTCGACCTGC TCGTCACCGC GAGGGTCGGG CGCACGACGC TCGGCGCGCG CTATGCCGAC
TATCGGGCGA AGCGCTTCGC CACCGACACC CGCAAATTCT GGCTGCAGGC GGATTGGACC
TTCTGA
|
|---|
| Protein sequence | MKTIIATAAV LAAAGPACAG KIALEPLIDA RIRYEHAEQD GLPDTADALT LRLRGGVQAG
SGAWSALVEG QGTLAAVDDY FDGLRGAATR PLVADPQSIG LYRAQLRYKS KALTLTAGRQ
RIAIDDERFV GAVGFRDNGQ TFDALRVEWT GLPRLKIDAA YAWSVRSIWG IDGRGARQQA
VSGDNVFVTI GYATPIGTLA GFAYLVDQDE AAVQGFALSS QTYGARLSGS RALSRAVRLS
YVLGYARQSD WHRNPNAYHA DYHLADATLD IASFKVDLGY EQLGASHGAA LTSFQTPLAS
GFKFQGWADK FLTTPPDGVR DIHAGAGHGW KKAGAFDLIA IEATWHRFDS DRLGRHYGDE
LDLLVTARVG RTTLGARYAD YRAKRFATDT RKFWLQADWT F
|
|---|
| |