| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1677 |
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| Symbol | |
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| ID | 5200275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1868678 |
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| End bp | 1870012 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581225 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001262178 |
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| Protein GI | 148554596 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTGC ACCCGGATAG TCGGCGCGCC GCGCCCACCG GCACGGCGCC ATGGCGCGAA
TGGTGGCTGG TCGGGGTGCT GACCGTCGCG AGCATGCTCG CCTATATCGA CAAGAACATT
GTCTCCCTCA TGGTCGTCTC GATCCAGAAG GACCTGGGCC TGCGCCCGGC GCAGGTGACG
CTCGCGCTCG GCACGGCCTT CGCGATCGCC AACATCCTGA TCAGCATTCC GGCGGGCTGG
CTCGCCGATC GCGTGCAGCG GCGATCGATC GTCGCGGTCG CGATCCTGCT CTGGTCGGCG
ATGGCGATCG CCTGCGGCAA CGTCACCGGC TTCGTCACCC TGTTGCTGGC GCGCGCCGGC
GTGGGCCTGG CGGAGGGGCT GTTGCCGCCC GCCTGCTACT CGATGATCGG CGACGGGGTG
TCGCCGCAGC GGCGCGCGCG GGCGTTGGGC GTCTTCTCGA TGTCGAACCT GGTCGGGACT
GGGCTCGCCT TCCTGGGGGG CGGGCTGCTG CTCGGGCTGC TCGGGCGGGT CGACTATTCG
GGCCTGCCGC TGGTCGGGCA CCTGCCGCCC TGGGGACTCG CGCTGGTGAT CACCGGCGCC
CTGGGCTTTC CGCTGCTGTT GCTGGTCTTC CTGTTCCGCG AGCCGAAGCG CCACGAGGCG
GCCGGCGACC AGGCGGCGGC GAGCCCGGAG CCGCCGAGCT GGAGCGAGGT GCTGCGCGCG
CTGGCCGCGC GGCGCGGCAT GCTCGTTCCG CTCGCCATCT TCTCGGTCGC GCATGCGATG
CTGACCAACT CGGTCAACCT CTGGATCGCG CCGCTGCTGA TGGGCCGGTT CGGCCTGACG
CCGGCCCAGA TCGGGACGCT GAGCGGCGCG CTCCTGCTGA CCGCCGGGCC AATCGGCCTC
TTCGTCGCCG GCGCGGTGAT CGATCGCCTC AACCGCCAGG GCCGCCACGG CGCCCAGCTG
ATCGCGCTGG TCGTCGCGGC GATCATGCTG CCCTGCGCGA TATTCCACGG GCTCGCCGCC
ACCCAGGCCA GCTTCTGGTT CTGGCAGGCG CTGCTCCTGC TGGTCGCGAC CACCTATCTG
CTGGTGACGT CGAGCATCGT CACGCGTGAA CTCCCGCCCG CCATGGTCGG GCGCGCGATC
GCCATCTTCC TGCTGCTCCA GGGACTGCTG GGCGTCGGCC TCGCGCCGAC CCTGACCGCG
CTCGCGATCG AGACGGTCTT TGCGGGGGAC GCGCAGCCGA TCGGCCATGC GATGGCGACC
ATGCACGGCG CTTATGCCGC CGTCGCGCTG GTCGCGGCGA TCGTGATGTT CCGGCGCGGC
CGGGCGCTGC GGTGA
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| Protein sequence | MLLHPDSRRA APTGTAPWRE WWLVGVLTVA SMLAYIDKNI VSLMVVSIQK DLGLRPAQVT
LALGTAFAIA NILISIPAGW LADRVQRRSI VAVAILLWSA MAIACGNVTG FVTLLLARAG
VGLAEGLLPP ACYSMIGDGV SPQRRARALG VFSMSNLVGT GLAFLGGGLL LGLLGRVDYS
GLPLVGHLPP WGLALVITGA LGFPLLLLVF LFREPKRHEA AGDQAAASPE PPSWSEVLRA
LAARRGMLVP LAIFSVAHAM LTNSVNLWIA PLLMGRFGLT PAQIGTLSGA LLLTAGPIGL
FVAGAVIDRL NRQGRHGAQL IALVVAAIML PCAIFHGLAA TQASFWFWQA LLLLVATTYL
LVTSSIVTRE LPPAMVGRAI AIFLLLQGLL GVGLAPTLTA LAIETVFAGD AQPIGHAMAT
MHGAYAAVAL VAAIVMFRRG RALR
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