Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1637 |
Symbol | |
ID | 5197091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1822311 |
End bp | 1823324 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581185 |
Product | LacI family transcription regulator |
Protein accession | YP_001262138 |
Protein GI | 148554556 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.455476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGA TCAAGATGGT TGCGGCCCGC GCGGGCGTTT CGACGGCGAC CGTGTCGCGC GCGCTCAGCA ATCCCGACAT CGTCGTCCCG GAAACGCGCG CCAAGGTGCA GGCCGCGATC GAGGAGCTCG GCTACGCTCC CAATTTCGCG GCGAAGAGCC TGCGGATGCT GCGCACCTCG AAGATCGTCA TGATGGTGCC CGACGTCTCC AATCCCTTCT TCTCGGAGGT CCTGCGCCGG GCCGAGGACA TGGCCGAGCA GGCCGGCTAT TCGGTGCTGC TGGGCGACAC CCGCGACGAC GCCAACCGGG AAGCCCAGTT CGCCGACATG CTCCAGCGCA AGGAAGTGGA CGGGGTGATC TTCCTCGGCC ACCGCATGCC GGTGACGCTG GTCAACGCGG TCAAGGACAA GGGGCCTCGG GCGCCGATCG TCAACAGCTG CGACTTCTCC CCGGCCTTCG GCGTTTCCGG CGTGCATATC GACAATGTCC GCGCGGCGCA GGAGGCGATG GCGCTGCTCC AGTCGATGGG GCATCGGCGG ATCGGCATCA TCACCGGCCC CGTCGAAAGC AACATCACCA GCGACCGGCT GACCGGGGTG AAGCGCGCCG CCGAGACGCC GGGACGCGAG ACCGAGCTGC TGATCCGCCA TGCCGATTAC ACGATCGAGG CCGGACAGCG GGAGACCGAG CGCCTCCTCG CCCTGCCCGC GCGCCCGACC GCGATCTTCT GCTTCAGCGA CGAGATGGCG GTGGGCGCGC TCGCCGCGTG TCGCGCCTAT GATCTCCAGT GCCCGCGCGA CCTGTCGATC GTCGGCTTCG ACGACATCCG CTACGCCCGC TATCTCGATC CGCCGTTGAC GACCGTGCGC CAGCCCATGG AGCTGATCGG CAAGACCGCC GTCAGGCTAT TGCTCGCCAT CATCGACGGC ACCGCCACCG AAACCCGGGT GGTGACGCTG GACCATGAAC TGGTCGTGCG CGGCAGCACC GGTCCGGCTC CCGTACTCCG CTGA
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Protein sequence | MSTIKMVAAR AGVSTATVSR ALSNPDIVVP ETRAKVQAAI EELGYAPNFA AKSLRMLRTS KIVMMVPDVS NPFFSEVLRR AEDMAEQAGY SVLLGDTRDD ANREAQFADM LQRKEVDGVI FLGHRMPVTL VNAVKDKGPR APIVNSCDFS PAFGVSGVHI DNVRAAQEAM ALLQSMGHRR IGIITGPVES NITSDRLTGV KRAAETPGRE TELLIRHADY TIEAGQRETE RLLALPARPT AIFCFSDEMA VGALAACRAY DLQCPRDLSI VGFDDIRYAR YLDPPLTTVR QPMELIGKTA VRLLLAIIDG TATETRVVTL DHELVVRGST GPAPVLR
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