Gene Swit_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1612 
Symbol 
ID5199476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1794138 
End bp1795034 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content63% 
IMG OID640581160 
Productenoyl-CoA hydratase 
Protein accessionYP_001262113 
Protein GI148554531 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGA GGAATGATGC GGCATTGACG CAGGTTCGGT ATGAGACTCC GCGTCCGCAC 
GTTGCCAGGA TCGTCCTGAA CCGCCCTGGG AAGCGCAACG CGCAAGGCAC GATCATGACC
TATCAGCTGG ACCGCGCCTT TCGAAACGCG TGCCACGACG ACGACGTCCA CGTGATCATC
CTCGCCGCCG AAGGCGACCA TTTCTGCGCC GGACATGATC TCGGCGGCAC GGAACCGGAA
TTCCCGACCA CCGAGGAAAC CGTCGGACTG TGGGGCCAAT ATGGCGGTCC CGGCTGGGAG
GGCTATTTCT CCCGCGAACG TGAACTTTAT TTCGATATCA CGGAGCGGTG GCGCAATATT
CCCAAGCCCA CCATCGCCGA AGTGCAAGGC GCCTGCATCG CCGGCGGCAA CATGCTGGCC
TGGGCCTGCG ATCTCATCGT GTGCGCGGAT GACGCCCGCT TCAAGGACAA CACGATCGAC
ATGGCGATGC CCGGCGCCGA ATTCTTCGCG CATCCGTGGG AACTGGGCGT TCGCAAGGCC
AAGGAATGGT TGTTCACCGG AGACTGGATC ACCGCGGCCG ACGCCGAGAA GCGCGGCATG
GTCAACCATG TGGTCCCGCG CGCCGAGCTG GCCGACTTCA CCCTCGATCT CGCCTCGCGA
ATTGCCGGGA AGGACAGATT CGCACTGAAG CTCGCGAAGG AAGCCTGCAA CGCAGCCCAG
GATTCAGCCG GCCGGCGCCA GGCCATGAGC ACGGCCTTCA TGCTTCACCA GATAGGTCAC
ATGCAGAATA TGATGGTGCA TGGCTTCCTG ATCGATACCA GCAACCTGAC ACCCAGCGTG
CGCCAAGCGC TCGAAGCGGC AAAGCGGGAC AGCGCAGCGC GGCGCGGCGC GCAATGA
 
Protein sequence
MEPRNDAALT QVRYETPRPH VARIVLNRPG KRNAQGTIMT YQLDRAFRNA CHDDDVHVII 
LAAEGDHFCA GHDLGGTEPE FPTTEETVGL WGQYGGPGWE GYFSRERELY FDITERWRNI
PKPTIAEVQG ACIAGGNMLA WACDLIVCAD DARFKDNTID MAMPGAEFFA HPWELGVRKA
KEWLFTGDWI TAADAEKRGM VNHVVPRAEL ADFTLDLASR IAGKDRFALK LAKEACNAAQ
DSAGRRQAMS TAFMLHQIGH MQNMMVHGFL IDTSNLTPSV RQALEAAKRD SAARRGAQ