Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1599 |
Symbol | |
ID | 5198284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1778444 |
End bp | 1779898 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640581147 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001262100 |
Protein GI | 148554518 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATAT CAGTGGGAGC CTTGTCGACC TATCACGCGA GGAACGATCC GAACCGCGCA TTGCTTATTC ACAATGATGG CATTTGCCGC CGCGCGGAGT TCGATGCGCG CGCGAACAAG CGCGCGCGGG CCTTGCAGCA AAAGGGGGTG GGGCAAGGCG ACTTCGTCAC GATGGCGCTG CCGAACGGCC TCGAATTCTA CGAAACCATC TTCGCGATCT GGAAGCTTGG CGCCGTTCCC TGTCCCGTTT CGGCGGCGCT GCCGCGCGCC GAGCTTGAGG CGATCATCGG GCTGGTGCAG CCGCGCCTCG TGATCGCGCC GCCCAACCTC GTCCCGTCGG GCCATCCCAG CATGCTGGCC GGCGCGCCCG TCGATGAAAT GCTTTCCAGC GCTCCGCTGC CTGACGTCGT TTCGCCTCAC CTGCGCGCGC TGACGAGCGG CGGCAGCACG GGACGGCCCA AGGTGATCGT CGATCATCTG CCCGGCATCT GGGACACGGA GGCCGAGTTG CTGCGCCAAC GAGCCGATGA CGTTCTGCTC AATCCTGGTC CGCTCTACCA CAACTCGCCG CTGTCCATGA CATGCTGCGC GCTGTTCATC GGTGCCGTCG TGGTCGAGAT GGGCAAGTTC GACGCCCTGA GAGCGCTGGA ACTGATCGAG AGGCATCGGG TCAGCTTCGT GACGTTCGTT CCGACCATGA TGCACCGCAT TTGGCGTTTG CCGGAGCGTG AAAGGTTCGA CGTCTCGTCG CTGCGGACCG TCTATCACAT GGCTTCGGTA TGCCCGACCT GGCTGAAGGA AGCCTGGATC GACTGGTTGG GTGCGGATCG CATCTGGGAG ATGTACGGGG GATCGGAACG ACAGGGTGGC ACCGAGATCA GCGGCCATGA ATGGCTCCTG CACAAGGGCT CGGTCGGCAG GCCGCTGGCG AATTGCAAGC TGCGGGTGCT CGATGAGGAT GGAGAAATCT GCCAGCCGGG GGTCGTCGGC GAGATCTATT TTCTCAACGA GGGCGGGCGG GGCGCCACCT ATCATTATAT CGGGGCCGAG GCCAAGGCGC ACGGCGAATG GGAAACCCTG GGCGACATGG GCCATCTCGA TGAGGAGGGG TATCTCTACA TCGCCGATCG CCGCACCGAC ATGATCGTCT CGGGCGGGGC CAACGTCTAT CCCGCTGAGG TGGAGGCCGC GCTCGACATG AGCCCGCACG TCGCGTCCAG CATCGTCATC GGCCTGCCCG ACGAAGATCT GGGACATCGC GTACATGCTC TGATCGAACT GTCGGCGGAA GCGCGAGGTG TCGTGGCGGC CGAGGATCTG CGCGACCATC TGGCGGCGCA TCTCACGCGC TACAAGATTC CGAGAAGCTT CGAGTTCGTC GACCATGCCC TGCGCGACGA CGCGGGCAAG GCGCGCCGCT CGGCACTGCG AGAAGCAAGG GTGGAGGCAT CGTGA
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Protein sequence | MQISVGALST YHARNDPNRA LLIHNDGICR RAEFDARANK RARALQQKGV GQGDFVTMAL PNGLEFYETI FAIWKLGAVP CPVSAALPRA ELEAIIGLVQ PRLVIAPPNL VPSGHPSMLA GAPVDEMLSS APLPDVVSPH LRALTSGGST GRPKVIVDHL PGIWDTEAEL LRQRADDVLL NPGPLYHNSP LSMTCCALFI GAVVVEMGKF DALRALELIE RHRVSFVTFV PTMMHRIWRL PERERFDVSS LRTVYHMASV CPTWLKEAWI DWLGADRIWE MYGGSERQGG TEISGHEWLL HKGSVGRPLA NCKLRVLDED GEICQPGVVG EIYFLNEGGR GATYHYIGAE AKAHGEWETL GDMGHLDEEG YLYIADRRTD MIVSGGANVY PAEVEAALDM SPHVASSIVI GLPDEDLGHR VHALIELSAE ARGVVAAEDL RDHLAAHLTR YKIPRSFEFV DHALRDDAGK ARRSALREAR VEAS
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