Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1582 |
Symbol | |
ID | 5199697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1759691 |
End bp | 1761292 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581130 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001262083 |
Protein GI | 148554501 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTGGG ATTACATCAT CGTCGGCGGC GGGTCCGCGG GCTGCGTTCT GGCCAACCGG CTGTCCGCCG ACCCCGGCCG GCGCGTCCTG CTGCTCGAAG CGGGCGGCTG GGACTGGTCG CCGGTGGTGC GCGTGCCTGC CGGCGAGGTG CTGGCGATCA TGAGCCCCAG ATATAATTGG CGCTATATGG CCGAGCCCGA TCCGTCGCGC GGCGGCCGCG CCGACATGTG GCCGGCGGGC AGGGTGCTGG GCGGCGGCAG CTCGATCAAT GGCATGATGT ATGTCCGCGG CAATGCTGGC GACTATGATC ATTGGGCGCG GCTCGGCAAC GAAGGCTGGG ACTATGAATC GGTCCTGCCC TATTTCCGGC GGGCCGAACG CAACGAGAAT GGCGGCGATG CCTTTCGCGG CGGGGAAGGG CCGCTATGGG TGTCGAACAG CCGGGCGCCG CACCCCCTGA CCCAGGTCTT CATCGACGCG GGCGTGGAGG TCGGCATCCC CGCCAATCCC GATACCAACG GCGCGGTCCA GGAAGGGATC GGACCGGTCC AGGCGACCCA GCGCAAGGGA TGGCGGCACA GCACGGCCCG CGCCTATCTG GCGTCGGCCG CCCGTCGCCG CAACCTGACC GTGCGGACCG GCGCGATCGC CACCCGCCTG CTGTTCGACG GCGATCGGGC GAGCGGCGTC GCCTATGTCC AGGGCGGACG CGAGTGCCGC GAATATTGCC GGGGCGAGGT CGTCCTCAGC GCGGGCGCGA TCGCCAGCCC CAAGCTGCTG ATGCTGTCCG GGATCGGCGA CGGCGATGCG CTCGACGCGC TCGGCATCGA GTGCCGGGTC GATCGCCCGG CGGTCGGCGG CAACCTTCAG GAACATCCCG GCGTGATCAT GACGATGCAC GTCAACGTCC CGACCTTCAA CGTCGAGAAG ACGCCGCTCA GGGCGATCCG CCACGCGCTC GCCTTCCTGC TGGCGGGGCG CGGGCCCGGC ACGTCGTCGA TCGGCCATGC GGCGGCGTTC GTGCGGATCG CGGAAGACGC CGACTATCCC GACATCCAGA TATCCTACTC GCCGATCACC TATGATTTCG GGCCGGACGG GCTGAAGCTC TACGAGAGGC CCGCGATCGG CGCGGCGGTC AATGTCTGCC GGCCGGAAAG CCGGGGCCGC CTGTCGCTGC GCTCGGCGGA CCCAATGATC GCGCCGCGGA TTGAGCATGC CCTGCTCGGA TCGGCGAAGG ACATGCGGCT GATGGTCGAG GGCTGCCGCC TGCTCCGGCG CATCTTCGAG GCACCGGCCT TCGCGCCCTA CAGGATCGAC GAGCGCAGTC CCGGCCCCGC CGTGCAGGAC GACGCGGAGT GGGAAGCATA TATTCGGCGC GAGGCTTTCC TGATGTACCA TCCGGTCGGC ACCTGTCGCA TGGGCAACGA CCCCGACGCC GTCGTCGATC CGCAATTGCG GGTCCGCGGC TTGGAGGGGG TCCGCATCGC GGATGCCTCG ATCATGCCGA CTCTGCCGAG CGCAAACACC AATGCACCGA CGATCATGAT CGGAGAGAAG GCTGCGGATA TGATGCTTTT CTGTCAGAGG GAAGCGAGAT AA
|
Protein sequence | MAWDYIIVGG GSAGCVLANR LSADPGRRVL LLEAGGWDWS PVVRVPAGEV LAIMSPRYNW RYMAEPDPSR GGRADMWPAG RVLGGGSSIN GMMYVRGNAG DYDHWARLGN EGWDYESVLP YFRRAERNEN GGDAFRGGEG PLWVSNSRAP HPLTQVFIDA GVEVGIPANP DTNGAVQEGI GPVQATQRKG WRHSTARAYL ASAARRRNLT VRTGAIATRL LFDGDRASGV AYVQGGRECR EYCRGEVVLS AGAIASPKLL MLSGIGDGDA LDALGIECRV DRPAVGGNLQ EHPGVIMTMH VNVPTFNVEK TPLRAIRHAL AFLLAGRGPG TSSIGHAAAF VRIAEDADYP DIQISYSPIT YDFGPDGLKL YERPAIGAAV NVCRPESRGR LSLRSADPMI APRIEHALLG SAKDMRLMVE GCRLLRRIFE APAFAPYRID ERSPGPAVQD DAEWEAYIRR EAFLMYHPVG TCRMGNDPDA VVDPQLRVRG LEGVRIADAS IMPTLPSANT NAPTIMIGEK AADMMLFCQR EAR
|
| |