Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1476 |
Symbol | |
ID | 5197226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1627908 |
End bp | 1628810 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640581024 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001261978 |
Protein GI | 148554396 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTC GCCTGTTGCG CTATTTCACC ACTTTGGCCC GCGAGGGGCA TTTCGCCCGC GCGGCTGAGG CGTGCGGCGT CACCCAGCCG ACGCTGTCGG CCGGGATCGC CACGCTGGAG GAGCAGTTCG GCCACCGGCT GGTGCTACGC GAGCGGCGCT ATATCGGGCT CAGCCCCGAA GGACAGGCGA TGCTGCCCTG GGCGCAGCAG CTCATCGCCG TCTATGACGG CATGGCCCAT GCGATGGAGG CGATCGACGG CCCGATCCAG GGCGAGTTCC GGCTGGGCGT GATCCCGGCG GCGATGCCGG CGACCGGCTA TCTGGCGCGG GCGCTGCTCG CCGGGCATCC GGCCTCGACC CTGTCGGTGC GCTCGCTCAC CTCGCGGGAG ATCGAGCGGG GCCTCGTCGC CTTCGACCTC GACGCCGGGC TCACCTATCT CGACCATGAG CCGCCGGCCG ACATGCTCGC CGCGCCGCTC TATGCGGAGC GCTACATCTT CCTCGCCCGC GCCGGCGGCG ACTTCGAGGG GCGAACGTCG ATCGGCTGGG CCGAGGCGGC CGGCTCCGAC CTCTGCCTGC TCCATCCGGG GATGCAGAAC CGCCGCATCC TCGACACGCG GCTCGCCGAG CGCGGCCTTG CCATCCGTCC GCGCGCCACC GCCGACAGCT ATGTCGCGCT GCTGGCGATG GTGCAGGCGG GCGGCTTCGC GACGATCATG CCCGACAGCT ATCTGGCGCT GCTGCCCGGC ATGAACTGGG CCCGCATCCT GCCGTTCGAC GATCCCGCCC CGGCCAGCCG GATCGGCGTG ATCGTCCCCA ACCGCCATCC GGTCGGCCCG CTCGCGGCGG CGGCGCTGGC GGTCGCGCGC GCCGTCGCGC TGCCCGACGG CTTCAAGATT TGA
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Protein sequence | MQLRLLRYFT TLAREGHFAR AAEACGVTQP TLSAGIATLE EQFGHRLVLR ERRYIGLSPE GQAMLPWAQQ LIAVYDGMAH AMEAIDGPIQ GEFRLGVIPA AMPATGYLAR ALLAGHPAST LSVRSLTSRE IERGLVAFDL DAGLTYLDHE PPADMLAAPL YAERYIFLAR AGGDFEGRTS IGWAEAAGSD LCLLHPGMQN RRILDTRLAE RGLAIRPRAT ADSYVALLAM VQAGGFATIM PDSYLALLPG MNWARILPFD DPAPASRIGV IVPNRHPVGP LAAAALAVAR AVALPDGFKI
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