| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1454 |
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| Symbol | |
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| ID | 5200847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1602954 |
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| End bp | 1603919 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581002 |
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| Product | protein translocase subunit secF |
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| Protein accession | YP_001261956 |
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| Protein GI | 148554374 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.982054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGC TGAAACTTGT TCCCGACAAC ACCAATATCG GCTTCGTCCG GGTCCGCTTC
ATCGCCTTCG TCATCACCGC GCTGCTGACC ATAGCGTCGC TCGCGGTGGT CGGCGCGCGC
GGCCTCAACA TGGGCGTCGA CTTCGTCGGC GGCCTGATGA TCGAGGCGAA ATTCCAGACC
GTGCCGCAGC TCGATGCGGT GCGCAGCAAC ATCGACGGCC TCGGCGTCGG CGTCAGCTCG
CTCCAGCAGT TCGGCGACCC GAAGACCGTG TCGATCCGCC TGCCGATCCC CGAGAGCAGC
GACGAGGGCG CGACCAACGC CGTCGTCAGC AAGGTCTCGG CCTCGCTGGT CAAGCAGTTC
CCCGGCGTCA CCTTCACCCG CTACGACACC GTGTCGGGCA AGGTGTCGGA GGAGCTGATC
CAGAACGGCG TGCTCGCGGT CATCCTCGCG GTGCTCGGCA TCGCGATCTT CTCCTGGCTG
CGCTACGAAT GGCAGTTCGG CGTGTCGACC TTCGTCGCGA TCGTCCACGA CGTGCTGATG
ACGCTGGGCT TCTTCGCGCT GACGCAGCTC GAATTCGACC TCAACATCGT CGCCGCGGTG
CTGACGATCA TCGGCTATTC GATCAACGAC AAGATGGTGA TCGACGACCG CATCCGCGAG
AACATGCGCA AATATCGCCA GATGGACATG AAGGCGCTGA TCGACCTGTC GGTCAACGAG
ACGCTGCCGC GCACCGTCAT GACCTCGGTC ACGGTGATGC TGGCGCTCGG CGCGCTGCTG
CTGTTCGGCG GCCATGTGCT GCGCGGCTTC GCGGCGGCGA TGATGCTCGG CATCGTCGTC
GGCACCTATT CGTCGGTCTA CGTCTCGTCG TCGCTGCTGA TCACCCTCGG GCTCGAGCCG
CAGCGCTTCT CCGCCAAGCC CAAGGAAAGC CGGCCCGACG CCGAGCGCGT CGGCCCGCAG
CCCTGA
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| Protein sequence | MRLLKLVPDN TNIGFVRVRF IAFVITALLT IASLAVVGAR GLNMGVDFVG GLMIEAKFQT
VPQLDAVRSN IDGLGVGVSS LQQFGDPKTV SIRLPIPESS DEGATNAVVS KVSASLVKQF
PGVTFTRYDT VSGKVSEELI QNGVLAVILA VLGIAIFSWL RYEWQFGVST FVAIVHDVLM
TLGFFALTQL EFDLNIVAAV LTIIGYSIND KMVIDDRIRE NMRKYRQMDM KALIDLSVNE
TLPRTVMTSV TVMLALGALL LFGGHVLRGF AAAMMLGIVV GTYSSVYVSS SLLITLGLEP
QRFSAKPKES RPDAERVGPQ P
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