Gene Swit_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1366 
Symbol 
ID5200699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1512722 
End bp1513114 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content68% 
IMG OID640580913 
Productthioesterase superfamily protein 
Protein accessionYP_001261869 
Protein GI148554287 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.147408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.255402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGGCCG CAGGCATGGA GCTGCCGCCG GCAGGCGACC CCGCGATACG CGTGGTCGCC 
ATGCCGGCGG ACACCAATGC CAATGGCGAC ATCTTCGGCG GCTGGCTGGT CAGCATGATG
GACCTTGCCG CCGGCACGGT GGCGTCGAAG CACAGCAAGG GCCGCGCGGC GACGATCGCG
ATCGACGGCA TGATCTTCCA TCGCCCGGTC AAGGTCGGCG ACATCGTGTC GGTCTATGCC
GATCTCCGGT CGGTGGGGCG CACCTCGATG AAGATCGAGG TCGCGGCCTG GCGCCAGGCG
CGCGACGGCA GCGAGAATGA ACGGGTCACC CAGGCGACGA TCACCTTCGT CGCGATAGAC
GAACAGGGAC GGCCCCGCGC CGTCGACGGA TAG
 
Protein sequence
MMAAGMELPP AGDPAIRVVA MPADTNANGD IFGGWLVSMM DLAAGTVASK HSKGRAATIA 
IDGMIFHRPV KVGDIVSVYA DLRSVGRTSM KIEVAAWRQA RDGSENERVT QATITFVAID
EQGRPRAVDG