| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1338 |
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| Symbol | rplF |
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| ID | 5200468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1493653 |
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| End bp | 1494186 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640580885 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001261841 |
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| Protein GI | 148554259 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.152453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGCA TCGGTAAGAA GCCGGTCTCC GTGCCGGCAG GCGTCACCGC CGCGATCGAA
GGCAAGACGC TGTCGGTCAA GGGGCCGAAG GGCACGCTGA GCATCAGCCT GGCCGACGAA
GTGAGCTATG CGATCGAAGA CGGCTCGATC TCGGTCCAGC CGATCAACGA GACCAAGCGC
GCGCGCTCCT TCTGGGGCAT GCAGCGGACC TTGGTGCAGA ACCTGATCAC CGGCGTGACC
GAGGGCTATT CGAAGACCCT CCAGATCACC GGCGTCGGCT ATCGCGCCAA CGTCCAGGGC
AAGAATCTGA AGCTGCAGCT CGGCTACAGC CACGACGTCG ACTTCGCGAT CCCCGAGGGG
ATCACGATCG CGACGCCGGA TCAGACGACC GTCCAGATCT CGGGCATCGA CAAGCAGAAG
GTCGGTCAGG TGGCCGCGGA AATCCGCCGC TGGCGGAAGC CGGAGCCCTA TAAGGGCAAG
GGCATCAAGT ACGCCGGCGA GTATATCTTC CGCAAGGAAG GGAAGAAGAA GTAA
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| Protein sequence | MSRIGKKPVS VPAGVTAAIE GKTLSVKGPK GTLSISLADE VSYAIEDGSI SVQPINETKR
ARSFWGMQRT LVQNLITGVT EGYSKTLQIT GVGYRANVQG KNLKLQLGYS HDVDFAIPEG
ITIATPDQTT VQISGIDKQK VGQVAAEIRR WRKPEPYKGK GIKYAGEYIF RKEGKKK
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