Gene Swit_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1329 
Symbol 
ID5200697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1486576 
End bp1487706 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content68% 
IMG OID640580876 
Productacyltransferase 3 
Protein accessionYP_001261832 
Protein GI148554250 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.828428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGGA TGCTGGTTCC GGCCGACCGG GGGCGCTTCT ACCGGAACAA TTTCGACGCG 
CTGCGACTCG CCATGGCGCT GCTCGTGGTC TTCTCGCACA GCTTCGCGCT GCGCTTCGGG
ACCGAAGCGT TCGAGCCGGT CTCGCTCGCC ACCAACGGCT ATTACAATGC CGGCCATGTC
GGCGTCTGGG GCTTCTTCAT CGTCAGCGGC TTCCTGATCG CGCACAGCCA TGAGCGCTCG
CGCTCGATCG GCGGCTATGC GGCGAAACGG GTGCGGCGCA TCTACCCCGC CTATCTGGTC
GCCACCGCGA TCTGCGCCTT CGTCGTGACG CCGCTGTTCG CCCCGCCGGG CTTCGCGCTG
ACCGCCGCGG AGGCGGCGCG GACGATCAGC GCGAACCTGC TGCTGGCCAA TCATTTCCCC
CTGCCCGACC TGTTCGCCGC CAACCCGGTC CACGCGGTCA ACGGCTCGCT GTGGAGCATC
AGGTTCGAGT TCCTCTGCTA TGTCGGGGTC GCGCTGCTCG GCGTGCTGGC GCTGCCGCTG
CGTCGATGGG CGGTGCCGCT GATCTATGTC GCCGTCGTCG CCACCTGGTG CTGGCTCGAC
CTCACCGGCC GCAAGCCGGG CGGCCCTGCC CTCGTCGCCG ACGTGATCGG CTGGCCCTAT
ATGTGGTTCC GGGTGCTGCC CAACTTCCTC GCCGGGATGA TCGTCTACCT GCATCGGGAT
AATATCCCGC GCTCGACGCC GCTGCTGCTC GCGGGCCTCG CCGCCTGCTT CCTGGGCTTC
CATCTCGGCG GACATGGACC GGCCGGGATC GTCGCGGCGC ATGTCCTCGC GCCGCCGGTG
ATGGCCTATC TGGTCTTCTG GATCGCCTTC CATCCGCGCA TCGACCTCAG CCGGGCGGCG
CGGTTCGGCG ATATCTCCTA CGGAACCTAT CTCTACGCCT ATGTCATCCA GCAGATGCTG
GTCGCCCAGG CGGCGGCCCT GCCCTTCCCG CTGTTCGTGC TGGCGTCGAT GCTGCTCGCG
CTGGCCGCGG GCGCGCTGAG CTGGTGGCTG GTCGAGCGGC ACTTCCTCGA CCATGGGCGA
CGGCCCGCCG AGCACCGGCC CGAAAGAAAG GAGGCGCCCG CTCTTCCCTG A
 
Protein sequence
MDRMLVPADR GRFYRNNFDA LRLAMALLVV FSHSFALRFG TEAFEPVSLA TNGYYNAGHV 
GVWGFFIVSG FLIAHSHERS RSIGGYAAKR VRRIYPAYLV ATAICAFVVT PLFAPPGFAL
TAAEAARTIS ANLLLANHFP LPDLFAANPV HAVNGSLWSI RFEFLCYVGV ALLGVLALPL
RRWAVPLIYV AVVATWCWLD LTGRKPGGPA LVADVIGWPY MWFRVLPNFL AGMIVYLHRD
NIPRSTPLLL AGLAACFLGF HLGGHGPAGI VAAHVLAPPV MAYLVFWIAF HPRIDLSRAA
RFGDISYGTY LYAYVIQQML VAQAAALPFP LFVLASMLLA LAAGALSWWL VERHFLDHGR
RPAEHRPERK EAPALP