Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1323 |
Symbol | |
ID | 5200686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1479424 |
End bp | 1481343 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640580870 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001261826 |
Protein GI | 148554244 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.207789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCGGA TCGGGCGTGG CCTTGCGACA ATGTCGCTGG CGATCGCGGT GGCGGTGATC GGCGCCGGGG CGGTGACGGG GCAGCCGGTG AGCGAGAGCG AGGCGCTGGA GAAGACCCGG ATTCGCTCGA CGGACGATTT CCAGGCGAAG GACGCCAGCG CGGTCGATCC CGCCACCGCG CCGGGCAAGG CGATCTTCGC CGAGCATTGC GCCGTCTGCC ATGAAGGCGG GGTGCCGAAG GCGCCGTCGC CGACCTTCCT GGCGATGATG CCGGGCGACG CGATCGTCGC CGCGCTGACC GGCGGGGTGA TGAAGGCGCA GGGTGCGGCG CTGTCCCCGG CGCAGCGGAT CGAGGTCGCC GAGTTCGTGA CGCGCCGCCG CCTGTCGGGC GAGGCGAAGC CGAAGCTGCC GCCGGTCTGC ACGGGCGCGC GGCTCGCTTT CGATGCGAAG GACCCGCCCC GCGCGGTGGG CTGGGGACAC GACAATCGCC GCTTCATCCC GGCCGACATG GCGAAGCTCG CCGCCGCTGA CGTGCCAAAG CTGGCGCTCA AATGGGCTTA TGCCTTCCCG GGAGCGCTAC GCGCCCGCTC GCAGCCCGGC TATGGCTGGG GGACGATGTT CGTCGGCAGC CAGGACGGCA CCGTCTATGC CTTCGACCTC GACAGCGGCT GCACCAAATG GACGCGGCGC GTCTCGGCCG AGATACGCAC CGCGATCGTC GCCGATGCCG CGACGAAGCG GCTCTATTTC GGCGACCTGC TCGGCCGCGC CTATGCGCTC GACGCCTTCA CGGGGAAGAT CCTCTGGTCG GAGAAGCTCG ACGACCATCC CGACGCGACG ATCACCGGCA CGCCGGCGCT GGGTGGCGGC TTGCTCTACG TGCCGGTCTC CTCGCTCGAG GTCGCGCAGC CGGCCGATCC CAAATATGCC TGCTGCAGCT TCCGCGGATC GGTGGTCGCG CTCGACCCGG CGACCGGGGC GGTCCGCTGG CGCGCCTATA CGGTGCCGCA GCCGCCGACC GAGCAGGGGA GGAATCCGGC CGACGCCCCG ATCCTCGGCC CGTCGGGCGC GCCGGTGTGG AACAGCCCGA CCTATGATGC GGAGCAAGGC CGGGTCTATT TCGGATCGGG CGAGAATTAC TCATCGCCCG CCGACGACAA TAGCGACGCG GTGTTCGCGG TCGACGCCAG GACCGGGCGG CGGCTCTGGC ACACCCAGCT CACCAAGGGC GACGCCTGGA ACGTCGCCTG CATGCTGGGT TCGGGGAGCT GCCCCAAGGA GAACGGCCCC GACCATGACG TCGCCGCCTC GACCCTGCTG ATCCCGATCG GCGGTGGCCG GCGGATGCTG GTGATCGGCC AGAAGTCGGG CGAGGCCTGG GGGCTCGATC CCGACAGCGG GCGGATCGCC TGGCAGCGGC AGCTCGGCCA TGGCGGCACC CAGGGCGGCG TGCATTTCGG CATGGCGGCC GACGGCACCC GCGTCTTCGT GCCGATCAAC GACATGCCCG ACACCGGCGA CGCGCGCGTC TATGACGCGT CGATCCGCGG ATCGGGGCTG CATGCGATCG ACGCCGCCAC CGGCCGGGTG ATCTGGAACG CCCGCGCGCC CGAAGACTGC GCCGGCCGCA AATTCTGCGA CACCGGCATC TCGGCGGCGG TGACGGCGAT CCCCGGCGTC GTGTTCGCCG GCCATCTCGA CGGCACCTTC CGCGCCTATG ACGCCGCGAC CGGCACGGTG CTGTGGCAGG TCGACACGAC CCGGCCGGTG CCGACGATCA CCGGCATCGA GGGCAAGGGC GGCTCGATGA GCGGCCCCGG CGCGCTGGTC GTCGACGGCC ATGTCGTGAT CAATTCGGGC TATGGCATGT ACAGCCACAT GGCCGGCAAT CTGCTGATGG TGTTCGCGCC GGCGCAGTGA
|
Protein sequence | MQRIGRGLAT MSLAIAVAVI GAGAVTGQPV SESEALEKTR IRSTDDFQAK DASAVDPATA PGKAIFAEHC AVCHEGGVPK APSPTFLAMM PGDAIVAALT GGVMKAQGAA LSPAQRIEVA EFVTRRRLSG EAKPKLPPVC TGARLAFDAK DPPRAVGWGH DNRRFIPADM AKLAAADVPK LALKWAYAFP GALRARSQPG YGWGTMFVGS QDGTVYAFDL DSGCTKWTRR VSAEIRTAIV ADAATKRLYF GDLLGRAYAL DAFTGKILWS EKLDDHPDAT ITGTPALGGG LLYVPVSSLE VAQPADPKYA CCSFRGSVVA LDPATGAVRW RAYTVPQPPT EQGRNPADAP ILGPSGAPVW NSPTYDAEQG RVYFGSGENY SSPADDNSDA VFAVDARTGR RLWHTQLTKG DAWNVACMLG SGSCPKENGP DHDVAASTLL IPIGGGRRML VIGQKSGEAW GLDPDSGRIA WQRQLGHGGT QGGVHFGMAA DGTRVFVPIN DMPDTGDARV YDASIRGSGL HAIDAATGRV IWNARAPEDC AGRKFCDTGI SAAVTAIPGV VFAGHLDGTF RAYDAATGTV LWQVDTTRPV PTITGIEGKG GSMSGPGALV VDGHVVINSG YGMYSHMAGN LLMVFAPAQ
|
| |