Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1230 |
Symbol | |
ID | 5197470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1386665 |
End bp | 1387720 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640580777 |
Product | hypothetical protein |
Protein accession | YP_001261733 |
Protein GI | 148554151 |
COG category | [S] Function unknown |
COG ID | [COG1565] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.369365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.219943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACAG CCGCGGAACT GGCGGACGCG CTGGTTCGAG TGATCCAGGC CAATGGGCCG ATCCCGGTCG CCGACTATAT GGAGGCGGCC AACGGCCTCT ATTATGCCGC GCACGACCCG TTCGGCGTGA AAGGCGATTT CATCACCTCG CCCGAGATCA GCCAGATGTT CGGCGAGCTG ATCGGCATCT GGATCGCCGA TCTCTGGACC CGCTCGCGCG CGCTCGGCGC CTATTATGTC GAACTGGGGC CGGGGCGGGG GACGCTCGCC GCCGACGCGC TGCGGGCGAT GGGGGCGCTG CGCCGCCATC CGGAGGTGCA TTTCGTCGAG ACCAGCCCGG TGCTGCGACG GCTCCAGAAG GAGAGGGTGC CCGACGCCGT CTGGCACGAG GGGATCGAGA CGCTGCCGAC CGACGCGCCA CTGATCATCG TCGCCAACGA ATTCTTCGAC GCGCTGCCCT ATCGCCAATA TATCAAGACC TATAGCGGCT GGCGCGAGCG GGTCGTCACC CATGACGCCG ACGGCTTCCG CCCGGTGCCG GGCGATGCCC CGGCCGAGGA TGTCGTCCCC GAGCATCTCC ACGACGCGGT CGCGGGCAGC ATCTACGAGA CCTCCCCGGC GGGTCTCGCC GTCGCCCGCG CGCTGGCGGC GCGGATCGTC AAGCAGGGCG GGGCATTGCT CGCGATCGAC TATGGGCATG AGAATTATGC GGCGGGCGAC ACGCTGCAGG CGCTCAACGC CCATGCCTAT GCCGACGTGT TCAGCAATCC CGGCGCCAAC GACATCACCG CCCATGTCGA CTTCACCGCG CTGGGCGAGG CCGGCCGGTT GGGCGGCGCG CGGATCGAGG GGCCGGTGTC GCAGAGTTAT TTCCTGGCGA CGCTCGGCAT CGCCGCCCGT GCCGCGGCGC TATCCCGCCA CCATCCCGAT CGCACCGAGG AGATCGGCGC CGCCTATCAC CGGCTGACGT CGGAGGAGGA GATGGGCACC CTGTTCCGCG CCATCGCGAT GGTCAGCCCG AAATGGCCGA AGCCCGCCGG GTTCGAGGTC GGCTGA
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Protein sequence | METAAELADA LVRVIQANGP IPVADYMEAA NGLYYAAHDP FGVKGDFITS PEISQMFGEL IGIWIADLWT RSRALGAYYV ELGPGRGTLA ADALRAMGAL RRHPEVHFVE TSPVLRRLQK ERVPDAVWHE GIETLPTDAP LIIVANEFFD ALPYRQYIKT YSGWRERVVT HDADGFRPVP GDAPAEDVVP EHLHDAVAGS IYETSPAGLA VARALAARIV KQGGALLAID YGHENYAAGD TLQALNAHAY ADVFSNPGAN DITAHVDFTA LGEAGRLGGA RIEGPVSQSY FLATLGIAAR AAALSRHHPD RTEEIGAAYH RLTSEEEMGT LFRAIAMVSP KWPKPAGFEV G
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