| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1225 |
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| Symbol | |
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| ID | 5196262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1382871 |
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| End bp | 1384271 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580772 |
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| Product | pyruvate dehydrogenase subunit beta |
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| Protein accession | YP_001261728 |
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| Protein GI | 148554146 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.541326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCG ATCTGAAGAT GCCCGCGCTT TCCCCGACGA TGGAGGAAGG CACGCTCGCC
AAGTGGCTCG TCAAGGAAGG CGACACGGTC AAGTCCGGCG ACATCCTCGC CGAGATCGAG
ACCGACAAGG CGACGATGGA GTTCGAGGCT GTCGACGAGG GCACGATCGC CGAGATCACC
GTTCCCGCCG GCACCGAAGG GGTGAAGGTC GGCACCGTGA TCGCCCGGAT CGCCGGCGAG
GACGAGGACG CCGCTCCGGC GCCGAAGGCC GCCGCCGAGC CGAAGGCGGA AGCCCCGAAG
GCCGAGGCTC CCGCCCCCGA GAGCCCGACC CCGCACAAGA TGGAAAGCGG CGCGCGCGAC
CTGGTCGCGG CGGTCGCCGA CACCCGCGAC GATCCCGAGG TGCCCGCCGG AACCGAACTG
GTGAAGACCA CGGTCCGCGA GGCGCTGCGC GACGCGATGG CGGAGGAGAT GCGCCGCGAC
GGCGACGTCT TCGTGATGGG CGAGGAAGTC GCGCAGTACC AGGGCGCCTA CAAGGTGACC
CAGGGCCTGC TCGACGAGTT CGGCGACCGG CGCGTGATCG ACACGCCGAT CACCGAATAT
GGCTTCGCCG GCATCGGCAC CGGCGCCGCG ATGGGCGGCC TCAAGCCGAT CGTCGAGTTC
ATGACGTTCA ACTTCGCCAT GCAGGCGATC GACCACATCA TCAACTCGGC CGCCAAGACC
AACTATATGT CGGGCGGCCA GATGCGTTGT CCGGTCGTGT TCCGCGGCCC CAACGGCGCC
GCCGCCCGCG TCGCCGCGCA GCACAGCCAG AACTATGCGC CCTGGTACGC CAGCGTGCCC
GGCCTGATCG TCATCTCGCC CTATTCGGCG GCCGACGCCA AGGGCCTGCT GAAGGCAGCG
ATCCGCTGCC CCGATCCGGT CGTGTTCCTG GAGAACGAGC TGCTCTACGG CCAGAGCTTC
GAGGTGCCGA AGCTCGACGA CTATGTCCTG CCGATCGGCA AGGCGCGCAT CTGCCGTACC
GGTTCCGACG TGACGATCGT CAGCTATTCG ATCGGCGTCG GCGTCGCGCT GGAGGCGGCC
AAGCAACTCG AGGGCGAGGG GATCGACGCC GAGGTGATCG ACCTGCGCAC GCTGCGCCCG
CTCGACAAGG CGACGGTGCT CGAAAGCCTC CGCAAGACGA ACCGCATGGT CGTCGTCGAG
GAAGGCTGGC CGGTCTGCTC GATCGCGTCG GAGATCATCA CGATCGCCAT GGAGGAGGGC
TTCGACGACC TCGACGCCCC GGTCCGCCGC GTCACCAACC AGGACGTGCC GATGCCCTAT
GCCGCCAATC TCGAAAAGGC GGCGCTGCTC AAGGTGTCCG ACGTGGTCGC GGCCGCCAAG
GCGGTGACCT ACAAGGGCTA G
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| Protein sequence | MAVDLKMPAL SPTMEEGTLA KWLVKEGDTV KSGDILAEIE TDKATMEFEA VDEGTIAEIT
VPAGTEGVKV GTVIARIAGE DEDAAPAPKA AAEPKAEAPK AEAPAPESPT PHKMESGARD
LVAAVADTRD DPEVPAGTEL VKTTVREALR DAMAEEMRRD GDVFVMGEEV AQYQGAYKVT
QGLLDEFGDR RVIDTPITEY GFAGIGTGAA MGGLKPIVEF MTFNFAMQAI DHIINSAAKT
NYMSGGQMRC PVVFRGPNGA AARVAAQHSQ NYAPWYASVP GLIVISPYSA ADAKGLLKAA
IRCPDPVVFL ENELLYGQSF EVPKLDDYVL PIGKARICRT GSDVTIVSYS IGVGVALEAA
KQLEGEGIDA EVIDLRTLRP LDKATVLESL RKTNRMVVVE EGWPVCSIAS EIITIAMEEG
FDDLDAPVRR VTNQDVPMPY AANLEKAALL KVSDVVAAAK AVTYKG
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