| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1191 |
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| Symbol | |
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| ID | 5196419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1352347 |
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| End bp | 1354581 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580738 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261695 |
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| Protein GI | 148554113 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.601925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGC CCATTCCCAT CAGCATCCGC ACCGGGCTTC CCCTTTTTCG TCGAGACTAT
ATATGGCCAT ATATAGTGAT TCGAAACGGC ACAAGCCGGC ACAAAAAGGG AAGCCTGATG
CAGTTGAAGA CGATCCTCCT CGCCACCGCG GCGGTCGCGG CGATGGCGCC GGCGCATGCC
GAGACCGCCG GCGACTCCGC CGGCAACGCC TTTTCGCTGG GCCAGATCAT CGTCACGGGC
GTCCGCCCGG CGGGCGTCGA GGTCGGCGGA TCGACGCTGA CCTCGGAGGC GATCTACGCC
TTCAACCGCA CCACGCTCGA CGAGGCGGCG AACCTGATCC CCGGCGTCGC GTCGGGCAAC
AGCGGCGGGT CGCGCAACGA GCGGCTCGTC TTCGTGCGCG GCTTCGACCG GTTCCAGGTG
CCGATCTCGA TCGACGGCAT CCGCGTCTAC CTGCCCGCCG ACAACCGGCT CGACTATGGC
CGCTTCCTGA CCCCCGACAT CGCCGAGATC CAGGTCGCCA AGGGCTATGC GTCGGTGCTC
GACGGGCCGG GCGCGATGGG CGGCGCGATC AACCTCGTCA CCCGCAAGCC CACCAAGGAG
ATCGAGGCGG AGGTGCGCGG CACGCTCAAC CTCGACCGCG GCGTCGACTA TGCCGGCTAC
AATGTCTTCG CGCTGCTCGG CACGAAGCAT GACCGGTGGT ATGCGCAGGG CTCCTACGCC
CGCAGCTTCA CCGATCATTG GGACCTGCCG GGCGACTATG TGCCGGTCGC CGGATCGGCG
GAGGACGGCG GCGCGCGCGA ATATTCGCGG ACGCGCGACT GGCGCGTCAA CGCGAAGCTC
GGCTTCACCC CCAACGACAC CGACGAATAT TCGATCAGCT ACACCCGGCA GGAGGGCAGC
AAGAACGCGC CGCTCCACGT CACCGATCCG GTGTCGAACC CGCTGCCGCC CGGCGCGCCC
AATCCGCGCT TCTGGAGCTG GCCCTATTGG AACATCGAGA GCATCTATTT CCTCTCGACC
ACCCAACTCG GCGAGCGCGC GACCTTCAAG ACCCGCGTCT ATCGCAACAG CTTCGACAAT
CTACTGAGCT CTTTCGACAA TGCGACCCAG GCGACGCAGA CGCTCGGCCG CTCGTTCAAC
AGCTATTATG AGGACAAGGC TTATGGCGGC TCGGCGCAGC TCGACCTCGC GATCACCGAC
GCCAACGCGC TGAGCCTTGC CTTCCACTAT CGCCGCGACA AGCATGTCGA GTTCCAGCAG
GGCTTTCCGA GCGGCGCCAC CGAGCCGCCG CAGACCAACG AGGAGGACAC CTACAGCGCC
GCCGCCGAAT ATCGCGCCGC CTTCTCGCCC ACGCTCAGCC TGACCGCCGG CATCAGCTAC
GATTGGCGCG AACTGCGCAA GGCCGAGGAA TATGCGACCC CGCCGGGCGA GCTGGCGCCG
CGCATCTTCG AATATCCGCG CGCCGACGCC TCGGCCTTCA ACTGGCAGGC GCGGCTCGAC
TGGCGGCCCG ACCAGGCCAC CAGCCTCCAC GCCGGCGTCT CGCGCCGCGC GCGCTTCCCG
ACCATCTTCG AGCGGTTCAG CACCCAGTTC GGCACCGCCG CCTCCAACCC CGGCCTGAAG
CCCGAGCGCG CGGTCAATTA CGAGATCGGC GGTTCGCGCC GGATCGGCGC CTTCCGCGTC
GAGGCGGCGG CCTTCTACAG CGACGTGCAG GACGCGATCG TCGCGGTCCG CCCGGTCGGC
TTCCCCGCCA ACACCACGCA GCGCCGCAAC CTCGGCGACG GCAAATATTA TGGTGGCGAG
ATCGCGCTGA GCTGGCAGCC GGCCAGCACG CTCGAACTGG GCGTCAACTA CACCTATATC
CGCCGCGAGT TCGACATCAC CCCGCAAGCG GCGGAGACGG TGCCGGTGTT CGCGCTGACC
GACGTGCCGA CCCACAAGGG CTTCGCCTAT GCGCGCTGGT CGCCGGTCGA GCGGCTGAGC
ATCTATCCGA ACCTCGACTT CGCCTCGAAG CGGACGACGC TCGACACCTT CGTGCCGGGC
GCGCCGGTCG GCACGGTCCG CTACTATCGC ACCGGCGGCT ATGTGCAGGC CAATCTGCGG
GTCGATTACG AGGTCTTCGA CAATGTCGAG ATCGGTGTCG GCGCCCGCAA CATCTTCGAC
AAATATTATG TCCTGACCGA CGGCTTCCCG GAGCCGGGGC GCAGCTTCTT CGCGAGCATC
CGCGCCCGCT ACTGA
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| Protein sequence | MARPIPISIR TGLPLFRRDY IWPYIVIRNG TSRHKKGSLM QLKTILLATA AVAAMAPAHA
ETAGDSAGNA FSLGQIIVTG VRPAGVEVGG STLTSEAIYA FNRTTLDEAA NLIPGVASGN
SGGSRNERLV FVRGFDRFQV PISIDGIRVY LPADNRLDYG RFLTPDIAEI QVAKGYASVL
DGPGAMGGAI NLVTRKPTKE IEAEVRGTLN LDRGVDYAGY NVFALLGTKH DRWYAQGSYA
RSFTDHWDLP GDYVPVAGSA EDGGAREYSR TRDWRVNAKL GFTPNDTDEY SISYTRQEGS
KNAPLHVTDP VSNPLPPGAP NPRFWSWPYW NIESIYFLST TQLGERATFK TRVYRNSFDN
LLSSFDNATQ ATQTLGRSFN SYYEDKAYGG SAQLDLAITD ANALSLAFHY RRDKHVEFQQ
GFPSGATEPP QTNEEDTYSA AAEYRAAFSP TLSLTAGISY DWRELRKAEE YATPPGELAP
RIFEYPRADA SAFNWQARLD WRPDQATSLH AGVSRRARFP TIFERFSTQF GTAASNPGLK
PERAVNYEIG GSRRIGAFRV EAAAFYSDVQ DAIVAVRPVG FPANTTQRRN LGDGKYYGGE
IALSWQPAST LELGVNYTYI RREFDITPQA AETVPVFALT DVPTHKGFAY ARWSPVERLS
IYPNLDFASK RTTLDTFVPG APVGTVRYYR TGGYVQANLR VDYEVFDNVE IGVGARNIFD
KYYVLTDGFP EPGRSFFASI RARY
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