Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1137 |
Symbol | |
ID | 5198839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1280828 |
End bp | 1282279 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640580684 |
Product | hypothetical protein |
Protein accession | YP_001261641 |
Protein GI | 148554059 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.136806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACG GGGACGCGCT GCCGCTGGTC GTCGACCTCG ACGGTACGCT GACGCCGGCC GACACGCTGG TCGAGTCGAT CGTCCTCCTC CTCAGGCGAT CGCCGCTGAA CCTGTTCAGG CTGATCCTGT GGCTGTTCGG CGGCCGGGCG GACTTCAAGC GCGCCGTCGC GCGCCACGTC ACCGTCGACG GCGCGGCCCT GCCGTACAAC CAGCCGCTGC TCGCCTGGCT GCGCGAGCAG AAGGCGCAGG GGCGCAGGAT CATCCTCGCG ACCGCCGCGC ACGGCAGCAT CGCCGAGCAG GTCCAGCGCC ATCTGGGCCT GTTCGACCTG CTGATCTCGA CGGCGGACGG CGAGAACATG AAGGGGCGCG CGAAGCTGGC GGCGATCCGC GCCGCGATCG GCGACCGCTT CGCCTATGTC GGCAATGGCG GCCCCGACAT GCAGGTATGG GCGGGATCGG ACGCCGCGAT CGCGGTCGAC GTGCCGGCCG GCGAACTGCG CAGGCTCCGC GCCGCCGTGC CGATCGAGCG CGAATTCCGG TCGGGCGAGG GACGTCTCGG CCTCTGGCTG CGCGCGCTGC GGGTGCATCA ATGGACCAAG AACGCGCTGC TGTTCGTGCC GCTGCTGACC GCCTTCTCCT TCCTCGATAT CGGCAAGACG ATCGACGTGC TGCTGGCCTT CGTCGCCTTC AGCCTGGTCG CCTCGGCGAG CTATGTCCTC AACGACATCG TCGACCTGGA GAACGACCGC GCCCACCCGC GCAAGAGCGA GCGGCCCTTC GCGAGCGGCC GGCTGCCGCT GCTCCACGGC GTGGCGCTCG CGATCGCGGG CCTCGTCGCC GGCGTGCTGG TCGCGACGGC GGTGTCCTGG GCGTTCGTCC TGATGCTGCT GTCCTATCTC GCGCTGACCA GCGCCTATAG CTGGACGCTC AAGCAATATG TGCTGATCGA CGTGCTCACC CTGTCGCTGC TCTACAGCTG GCGGATCATG GCGGGCGCGG TCGCGATCGA CGTCCGGCTG AGTTCCTGGC TGCTCGCTTT CTCGGTGTTC GTGTTCCTCA GCCTCGCCCT GATCAAGCGC TGCACCGAAT TGCTGGTGGC GCAGGGCAGC GGCCGGGCCG GGCTGCGCGG CCGCGATTAT CGCACCACCG ACCTGGCGGT GCTGTGGCCG CTCGGGGCCG GCAGCGCGCT CAGCTCGGTG GTGATCTTCG GCCTGTTCAT CAGTTCGCCC GAGACCGCCG GCCGCTATGC GAGCCCCGAG CTTCTCTGGC TCGCCGCCTT CGGGCTGATC TACTGGCTCG GGCGGATGTG GGTGAAGACC TCGCGCGGGG AGATGCATGA CGATCCGATC GTCTATTCGT TCAAGGACCG CGGGAGCCGG ATCGCGCTGG CCGGCATCAT CGCGGTGATG ATCGCCGCCC GCTTCGTGCA TGTCGTGGTG CTGCATGGAT AA
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Protein sequence | MADGDALPLV VDLDGTLTPA DTLVESIVLL LRRSPLNLFR LILWLFGGRA DFKRAVARHV TVDGAALPYN QPLLAWLREQ KAQGRRIILA TAAHGSIAEQ VQRHLGLFDL LISTADGENM KGRAKLAAIR AAIGDRFAYV GNGGPDMQVW AGSDAAIAVD VPAGELRRLR AAVPIEREFR SGEGRLGLWL RALRVHQWTK NALLFVPLLT AFSFLDIGKT IDVLLAFVAF SLVASASYVL NDIVDLENDR AHPRKSERPF ASGRLPLLHG VALAIAGLVA GVLVATAVSW AFVLMLLSYL ALTSAYSWTL KQYVLIDVLT LSLLYSWRIM AGAVAIDVRL SSWLLAFSVF VFLSLALIKR CTELLVAQGS GRAGLRGRDY RTTDLAVLWP LGAGSALSSV VIFGLFISSP ETAGRYASPE LLWLAAFGLI YWLGRMWVKT SRGEMHDDPI VYSFKDRGSR IALAGIIAVM IAARFVHVVV LHG
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