| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1079 |
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| Symbol | |
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| ID | 5199657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1207811 |
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| End bp | 1208461 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640580624 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001261583 |
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| Protein GI | 148554001 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.325011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGGATAG TCTACGACGA AAGGCGGTTG AGAACCGGAC CGGCATTGGC CGATGACACC
CAGAACCGAC AGGCATATAG TCCTGCCGGA AAGCGGCCGT GGGTGTCCGG ATTGAAGAGA
AGCGTGCCTG CTACCGCCGG TGACGGCGGC GGGGAACTCG ACCTCCTATA TCGTCACCAT
CGTGACACGA TCGTCCGCTA CGTTCGGCGC GCCTTCGGCA GCGGGCCGCC CGATCCGGCC
GATGTCGCCC AGGCCGCCTT CGAGAAATTC CTGGCCATCG ACGGTCGCGA CGACATCGCC
AATCCCCGGG CCTTCCTGAT CGCCAGCGCT CGCAACCTCG TGCTCGACCA ACGTCGCCGG
CTGAAAGTCC GTAGCGACTA TGCATCGGAC GCCCGGGCGA CGGCCGACGA GACGGACGAT
TTCAGCCCCG AGCGGGTCCT GGTGGCGAAG GAACAATGGC GTATCCTGGA AGACGCGATC
CAGAAGATGG ACGCGCGCCG CCGTGACATT CTCGTCATGA GCCGAATCCA CGGCCTGAGC
AGCGCGGAGA TCGCGCGACG GATGAATTGT TCGGCGACGC TGGTGAAGAT GCTGCTGGCT
CAAGCCCTCG TGCTATGCCA CCGCGCATTA TCCGAGGTGG AAGGTGAATA G
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| Protein sequence | MGIVYDERRL RTGPALADDT QNRQAYSPAG KRPWVSGLKR SVPATAGDGG GELDLLYRHH
RDTIVRYVRR AFGSGPPDPA DVAQAAFEKF LAIDGRDDIA NPRAFLIASA RNLVLDQRRR
LKVRSDYASD ARATADETDD FSPERVLVAK EQWRILEDAI QKMDARRRDI LVMSRIHGLS
SAEIARRMNC SATLVKMLLA QALVLCHRAL SEVEGE
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