| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1075 |
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| Symbol | |
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| ID | 5196800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1200395 |
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| End bp | 1202344 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580620 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001261579 |
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| Protein GI | 148553997 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0882552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGG ATGGGAATGC ACCGAGGTTC GGTGGCGGGG CAGACATAAG TCTGGGGATG
GGCTGTCCCA TCACCCGGCG CGATTTCGTC AATGGATCGC TGGCCGCCTC GGGTGTGCTG
GCGCTCGGTG GCCCAGCTTC CGCCAGAGGG ACGGCTGGCT CGGTCAACCG GCCCTCGGGC
TCGGCCTGGA CAGGCTATGG CGGTGTCGGC GACTATCAGT GGGCCAACGG CAACACCGAA
GCGGTCGTCA ATGCCGCCCA TGAGCTCCGC GACGGCCTGC ACGACATGTC CCTCTCAGGC
GCGGTCGAGG AGGACTATGA CCTGGTGGTT GTTGGCGGCG GCTTCACGGG GCTGACCGCA
GCGTATGAGT TCTCGAGACG CGCCAAGGCG GGGCAAAAGG TCCTGTTGCT GGAGAATCAT
CCCTTTCCCG GTGGCGAGGC CAAGCAGAAC GAGATCGATG TCGACGGTAT CCGCGTCGTC
GGCCCGCAGG GATCCAACGG CGCGGCCCAA GTCACCCCGG CGCTCGATGG CACGCCTTAT
GAGACCTATG CGAATTATGT CCGTGAGCTG GGAATTCCCC TCAGCTTCGA GCTGCAGCCG
CTGGGCGGCG GCGCGGAGAA ACTGGAACTG CCCAACGAGC ATTTCGATTC GATGTTTCCG
ACATCGCTTG CTCCGCTCAA CTATTATTTC GGACCGGGGC AATGGGCGGC CAATCCGGCT
CGGCAAGGGT TCACCAACAC CCCCTGGCCC GCCAACGAGC AGCGCGATCT CGACGATTTC
GTCCATAATC GTCGCGACCT GATCTCCAGG GAGGCGGATC CCGACCGCTG GCTCGACAGC
ATGACCTACG CGGAATTGCT CAGGAAGCTC GGCTATGGCG ACCGCGTCAT CGACTTCGCC
GATCCCTATC TTGCGGTGGG CCTGTTCGGG GTGAGCAGCG AGGCGGTCTC GGCCAAGGCG
GTGAGCATCG TCGGCCTTTC CGGTACCAAG CCGACCGAGG CATCCTCGAA ACGGCTGGGC
GCCCATGCGA TGTCCTTTCC GGGCGGCAAT GCCGGCATCT ACCGCGCGAT GCTGCGCAAG
CTGGTGCCGG AGAGCTTCGC GCCGCAGGCC ACGCTCGATC AGGTGATGGT GACGGGCTCG
GCCAATCTTG CGGCACTCGA TCGCCCGGGT CAGCGAGTTA GGATTCGCTG CGGCAGCATG
GCTGTCCGTG TCGAACATGT CGGCGCTCCC AGGGCCGCGG AACAGGTGAT GGTAACTTAT
CTCCGCGACG GCAAGCTGCA TCGCGTGCGC GGCAGGTCGG TCGTTATCGC GGCTGGTGGT
TGGGTCACGC GGCGCCTGGT GCGCGACCTG ACGCCCGAGC TGGCCCAGGC GTTTTCGGGC
CTGCGTTACG GTCCGGTGCT GGTCGTCAAC GTCGCGGTGC GCAACTGGCG ATGGCTCGCC
AAATTGGGAC TGCCGGGGGT GCGCAGCTTT GCCGGCGGCC TGTTCTGGCA CGTCACCGCC
CGGCAGAATT TTGCCCTGGG CAGCGACCGG CGCACCCTGA CCCCCGATAC CCCTCTCATG
CTCACCTTCT ACATTCCCGT CCTCAAACGC GGCGAGGATC CCGACCTGCA GGGCGCGCTC
GCGCGGATGG ACATCATGCA ATGGTCCTAT GCCGATATCG AGCGACGGCT GCGGACGCAG
ATGAACGACA TCTTCGGACC GAGCGGATTC GAGGCCCGGC GCGATATCGC CGGCATCGTC
GTCAATCGCT GGGGGCACGC CTATTCAGCG CCGCGGCCGG GCTTCTTCTT CGCCGCTGAC
GGCAGCGCCA GCCCTCAGCA GCTCCTGCAG ACGCCGCACG GCCGGGTGGT TTTCTGCCAC
AGCGAGCTGG AGGGACGGCA GAGCATGGCC AACGCCATGC TGCAGGGCCG GCGTGGTGCG
CTCGACGCGC TGAACATCCT CGACGGCTGA
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| Protein sequence | MGKDGNAPRF GGGADISLGM GCPITRRDFV NGSLAASGVL ALGGPASARG TAGSVNRPSG
SAWTGYGGVG DYQWANGNTE AVVNAAHELR DGLHDMSLSG AVEEDYDLVV VGGGFTGLTA
AYEFSRRAKA GQKVLLLENH PFPGGEAKQN EIDVDGIRVV GPQGSNGAAQ VTPALDGTPY
ETYANYVREL GIPLSFELQP LGGGAEKLEL PNEHFDSMFP TSLAPLNYYF GPGQWAANPA
RQGFTNTPWP ANEQRDLDDF VHNRRDLISR EADPDRWLDS MTYAELLRKL GYGDRVIDFA
DPYLAVGLFG VSSEAVSAKA VSIVGLSGTK PTEASSKRLG AHAMSFPGGN AGIYRAMLRK
LVPESFAPQA TLDQVMVTGS ANLAALDRPG QRVRIRCGSM AVRVEHVGAP RAAEQVMVTY
LRDGKLHRVR GRSVVIAAGG WVTRRLVRDL TPELAQAFSG LRYGPVLVVN VAVRNWRWLA
KLGLPGVRSF AGGLFWHVTA RQNFALGSDR RTLTPDTPLM LTFYIPVLKR GEDPDLQGAL
ARMDIMQWSY ADIERRLRTQ MNDIFGPSGF EARRDIAGIV VNRWGHAYSA PRPGFFFAAD
GSASPQQLLQ TPHGRVVFCH SELEGRQSMA NAMLQGRRGA LDALNILDG
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