| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0924 |
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| Symbol | |
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| ID | 5200550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1025098 |
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| End bp | 1027485 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580470 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261429 |
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| Protein GI | 148553847 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCC AGCGACGCCG CGCCTTCCGG CGGGGACTTA CCCTGTCCGC AGCCCTGATC
GGGATCATCG CCGTTCCGGC CCATGCCCAG GCGGCCGACG ACGCCGTCGC CGAGGGGGAG
ATCGTCGTCA CCGCCAACAA GCGCACCCAG GCGCTCAAGG ACGTCGGCGT GACGGCGGCC
GTGCTCGGCG CGCAGCAGCT CACCGAGCGC AAGATCGTGT CGCTGGCCGA CATCGCCGCG
ACGGTACCGG GCCTGTCCTA TTCGTCGAGC GAGAACAACA CCCCTGTCTT CACGCTGCGC
GGCGTCGGTT TCAACGAGGC GTCGCTCGCG GCTTATCCCA CGGTCAGCGT CTATACCGAC
GAGGCGCCGC TGCCCTTCCC GGTGCTGTCC GCGCAGGGCG CGTTCGACCT CGACCGGATC
GAGGTGCTGA AGGGGCCGCA GGGCACGCTG TTCGGCCAGA ACTCGACCGG CGGCGCGATC
AACTATATCG CCGCCAAGCC GACCGACACG CTCTCCGCCG GGGCCGACCT CAGCTATGGC
CGCTTCAACA TGGTCGAGGC GAACGGCTTC GTCAGCGGTC CGCTCGGCGA GCAGCTCAAG
TTCCGCCTCG CCGGCCATTA TCTGCACGCC GACGACTGGC AGAAGAGCTA TACCCGCAAG
GACAGCCTGG GCGAGTCCGA GGTCTATGCG GTGCGCGGGC TGCTCGACTG GGAGCCGGCC
GACACGGTCA AATTCTCGCT CATGCTCAAC GCCTGGCAGG ACAAGTCCGA CCCGCAGGCG
GGCCAACTCG TCGCGGTCTA TCCGCAGATC GCGGCGGCCG CCTATCCCGA GGTGGTGAAC
TATCCCTATC CGCCGCAGAA CGCCCGCGCC GCCGACTGGT CCAACGGCAC GACGGTCAGC
CCCACCGGCT CGATCCTCGA TCCGCGGCCG CGATCGAACC GCAAATTCCA GCAGGCGGTG
CTGCGCGGCG ACATCGACCT GACCGACCAG GTCACGCTGA CCTCGCTCTC CTCCTACCTC
CATTTCCGGC AGCGGCAGAG CCAGGACTAT GACGGCACCG CCAGCAACAA TGACGACATC
CCGTTCAACG ACGGCACGAT CAAGTCGGTG TTCCAGGAAC TGCGCCTGTC GAACGGCGGC
CGATCGTCGA TCCGCTGGGT GCTCGGCGCC AATTACCAGC GCAGCCGCAT CCGCGAGAAT
GACGGGATCA GCTATTCGAC CGGCAGCACC AGCAATGCCG GGCTGAACTT CATCATCCAG
AACGGCTATC GCAGCAATAC GCTGCGCCGC GACTATGCCT TCTTCGGCAA TGCCGAGGTC
GACGTCGCGC CGGGCCTGAC GCTGAAGGCC GGCGCGCGGT ACACCAACAG CCTGACCGGC
GTGAACCTGT GCAACACCGA CCTCGGCGAT GGCCGGACCG CGGCGCTGAT CTCCGGTCTC
TCCGCGCTGC TGACCGGCGG GCCGGCGCCG GTGGTGCGCC CCGGCATCGA CTGCGTGACG
CTGAACAGCA GCTTCCAGGT CGGCCAGCCC TTCATCGACT CGCTGAAGCA GCACAACACC
TCGTGGCGCT TCGGCGTCGA CTACAAGCTC AACCGGGACG TGCTGCTCTA CGCGAACGTC
TCGCGCGGCT ACAAGGCGGG CAGCTATCCG ACGATCAGCG CCTCGTCGGA GGCGCAATAT
ATCCCGGTCA CCCAGGAGAG CGTCACCGCC TATGAGGCCG GCGCGAAGCT GACCACGGCG
GACCGGACGT TCACGACCAA CGTCGCCGCC TTCTACTACG ACTATCGCAA CAAGCAGATT
CGCGGGAAGA CGCTCGATCC GATCTTCGGC GTGCTCAACG CGCTGATCAA CGTGCCGAAG
TCGCGCCTCT ACGGCGCCGA GATCGAAGCG GGCGTGCGGC CCTTCCGCGG CCTCGCCCTC
GGCGCGTCGG TGACCTATGT GAACTCGAAG GTGCAGCGCT ACACCGGCAC CAACGTGCTG
GGCGTCCAGC AGGATTTCGC AGGCTCGTCG ATTCCCTTCT CGCCCAAGTG GCAGGCCCAG
GTCGACGGCG AATATCGCTG GGACATGGGC GGGGTGACGC CGTTCGTCGG CGCGGTGCTG
AACGTCCGGG CGAAGACGAT CGCCTATATC GGCGGATCGG ACCTCACCAT CCCCGCGTCG
CCCGTCAACA GCATGGCGCC GGGCGTCACC AGGCCCTTCG CGATCAAGGG CTACGAGACC
GTCGACCTGC GCGCCGGCGC GGAATGGGGC CAGTGGAAGG CGATGATCTG GGGCAAGAAC
GTCTTCGACA CATATTATTG GCAGAACGTC ATATCGGCGT TCGACACCGT CTATCGGCTT
GCGGGCCGGC CGGCCTCCTA CGGCGTGACC GTGGGGTATA AATTCTAG
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| Protein sequence | MTSQRRRAFR RGLTLSAALI GIIAVPAHAQ AADDAVAEGE IVVTANKRTQ ALKDVGVTAA
VLGAQQLTER KIVSLADIAA TVPGLSYSSS ENNTPVFTLR GVGFNEASLA AYPTVSVYTD
EAPLPFPVLS AQGAFDLDRI EVLKGPQGTL FGQNSTGGAI NYIAAKPTDT LSAGADLSYG
RFNMVEANGF VSGPLGEQLK FRLAGHYLHA DDWQKSYTRK DSLGESEVYA VRGLLDWEPA
DTVKFSLMLN AWQDKSDPQA GQLVAVYPQI AAAAYPEVVN YPYPPQNARA ADWSNGTTVS
PTGSILDPRP RSNRKFQQAV LRGDIDLTDQ VTLTSLSSYL HFRQRQSQDY DGTASNNDDI
PFNDGTIKSV FQELRLSNGG RSSIRWVLGA NYQRSRIREN DGISYSTGST SNAGLNFIIQ
NGYRSNTLRR DYAFFGNAEV DVAPGLTLKA GARYTNSLTG VNLCNTDLGD GRTAALISGL
SALLTGGPAP VVRPGIDCVT LNSSFQVGQP FIDSLKQHNT SWRFGVDYKL NRDVLLYANV
SRGYKAGSYP TISASSEAQY IPVTQESVTA YEAGAKLTTA DRTFTTNVAA FYYDYRNKQI
RGKTLDPIFG VLNALINVPK SRLYGAEIEA GVRPFRGLAL GASVTYVNSK VQRYTGTNVL
GVQQDFAGSS IPFSPKWQAQ VDGEYRWDMG GVTPFVGAVL NVRAKTIAYI GGSDLTIPAS
PVNSMAPGVT RPFAIKGYET VDLRAGAEWG QWKAMIWGKN VFDTYYWQNV ISAFDTVYRL
AGRPASYGVT VGYKF
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