| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0816 |
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| Symbol | |
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| ID | 5196680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 906170 |
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| End bp | 907129 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580360 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001261321 |
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| Protein GI | 148553739 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCCG ACCGTTTGTT CGACCTGTTT CACTCTGAAG CCTTTTCGGA ACTTCCGCTG
ACCTTCGCCC AGGGCCGCCA CGGATGCGCG CCCAACCTCA GCGCCGCGCC CTGGGGGCGG
GCGCATGATC TCGGCTACAT CTTCTACTAT CCCACCTATT TCGCGCAGGC GCGCATCGAG
CTGCGGCACC ACCTGATCGG CATCGAATAT GAGCCGGGCG TGGTGCGCGT CCAGCTCGGC
TCGGGGCTGT CGCTCGACCG GATCGTCAAG TCGCGCTCCT TCTACTTCGT CCCTGCCGGC
TCGACGATCG AGGTGCGCAA GGAGAATGCG TGCGAATATG TCCTGATCAC CCTCGATCCC
GAACGCAGCG CCTCGCTGCT GCCCGAGCTC GAAGCGTTCG GGATGCTGGA GAATGTCATC
GACGACCGGA TCAGCGACGC CGCCTTCCGC TTCCGGCGGG ACCTGCTGCG CGACGGCGCG
GCGGACGATT CCGTCCAGGA ACTCGTCCGC ACCGTCATCG ACGTCCTGCG GCGCGGGCCC
GGCGACATCG GCGCGGGTTC GGAGCGGGTC CGCATCTCCT CGCTGCGGCT CAAGCGCGCG
CTCGACTATA TCGGCCGCCA TTATTCGAAG AAGATCTCGG TCGAGGAGAT CGCCGCCGCG
GTCGGCGGCA TCAGCGCCTT CCACTTCGCC CATGTGTTCC GGTCGTCGCT GGGGCAGGCG
CCGCACCAAT ATGTGCTCGA ACACAAGCTG CACCGCGCCA GGACCTTGCT GATCGAAACC
CAGGGCGACA TCGCCGGGAT CGCCTATGCG GTCGGCTTCT CCAGCCAGGC GCACATGACC
GAGGCCTTCA GCCGACGCAT GGGGGTGACG CCCGCGCAGT TGCGCCGCGC GGCGGAGATG
CTGATGCCGG GGAGAAGCGC GACCAGCCTC GCCTTCGCCG GGCCGCACGG CATGGCCTGA
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| Protein sequence | MEADRLFDLF HSEAFSELPL TFAQGRHGCA PNLSAAPWGR AHDLGYIFYY PTYFAQARIE
LRHHLIGIEY EPGVVRVQLG SGLSLDRIVK SRSFYFVPAG STIEVRKENA CEYVLITLDP
ERSASLLPEL EAFGMLENVI DDRISDAAFR FRRDLLRDGA ADDSVQELVR TVIDVLRRGP
GDIGAGSERV RISSLRLKRA LDYIGRHYSK KISVEEIAAA VGGISAFHFA HVFRSSLGQA
PHQYVLEHKL HRARTLLIET QGDIAGIAYA VGFSSQAHMT EAFSRRMGVT PAQLRRAAEM
LMPGRSATSL AFAGPHGMA
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