| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0789 |
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| Symbol | |
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| ID | 5196334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 872717 |
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| End bp | 874276 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580333 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001261294 |
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| Protein GI | 148553712 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTTCG CCCGCTTCCT CGACCAGGGC GCGCGGATCG ATCCGGAGGG AACGGTCCTG
CTGCAAGGCG ATCGCCGCTG GCGCTATGCC GAGGTGCAGG TGTTCACCCG TCGTTTCGCC
CGGCGCGCGC GGGATGCGGG CTTCGCGCCC GGCAGCCGCG GCGCCGTGCT GTCGCTGAAC
GACGCCGTCG CCTTCCAATG CGCCTTCGGC CTCCATCGCG CCGGGATGAG CTGGATTCCG
ATGAACCCGA AGAACGGCGA GGACGACGCC CGCTACACGC TGGACATGTT CGAATGCGAC
CTGCTCGTCT TCCACAGCCG CTTCGCCGAC ATGGTCCGGG CGATCCGCCC GCAACTGCCC
CGCATCGCCG CCTATGTCTG CCTCGACCGG CGGATCGGCG ACATCCCGTC GCTCGACGAA
TGGCTGTCGG GCGTGCCCGA CGGCTGGACC GATCTTCCGC TCGACAATGA CGCGCTGGCG
ATCATCATGC CGACCGGGGG CACCACCGGC CGGCCGAAGG GCGTCATGCT CACCGAGCGC
AATCTCGCCG CGATGGTCGC CACCTATCTG TTCAGCTTCG TCTATCGGAC CGGCGAGCGT
CCGGTGGCGA TGGCCGCCGC GCCGCTGACC CATGCGGCCG GGCCGCTCGC CGTTCCGGCG
ATCGCGCGGG GCGGCGCCGT CGCGATCCTG CCCGCGCCCG ATATCGACGC GATGCTCGAC
ACGATCGAGG CGCAGCGGGT GACCGAGTTC TTCCTGCCGC CGACGCTGAT CTACCGGATG
CTCGACCATC CCGGCATCGG CGACCGGAAC CTGCGGTCGG TCCGCTATTT CGGCTATGGC
TCGGCGCCGA TGTCGGTCGA GAAGCTGAAG CGCGCGATCC GGCTGTTCGG GCCGTGCCTG
ACGCAATTCT ACGGCCAGTC CGAGGCCCCC GCGCTCTGCA CCTTCCTGGC GCCCGAGGAG
CATGTTGACG ACAACGGCGA TCCCGCCCCC GATCGGGTCC TGTCCAGCTG CGGGCGGCCG
ACCGCGCTGA TCGAGCTGCG CATCCTCGAC GCCGACGACC GCGAGGTCCC GGCGGGCGAG
ATGGGGGAGG TGTGCGTGCG GGGCGATCTC GTCACCCCCG GCTATTACCG CCAGCCCGAG
CTGACCGCCG CGGCGATCGT CGACGGATGG CTGCACACCG GCGACATCGG CTTCCTCGAC
GGCGAGGGCC GCCTGCACGT CTGCGATCGC AAGAAGGACA TGATCATATC GGGCGGCCTC
AACATCTACC CGCAGGAGAT CGAGCAGGTG ATCTGGTCGC ATCCGGCGGT CGCCGATTGC
GCGGTCATCG GCGTGCCCGA CGAGGAATGG GGCGAGCTCG TCACCGCCGT CGTCGAGACG
ATCGAGGGGC AGGATATCTC GGCGGACGCG GTGCTGGGCC TGTGCCGGCA GCGCCTGGGG
AGCGTCAAAT GCCCGAAGCG CGTCGATTTC GTCGACGCGC TACCGCGCAG CCCGAACGGC
AAGGTGTTGA AGCGCGTCCT GCGCGACCGT TACTGGGCCG CCGTCGGGCG CCGGATCTGA
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| Protein sequence | MFFARFLDQG ARIDPEGTVL LQGDRRWRYA EVQVFTRRFA RRARDAGFAP GSRGAVLSLN
DAVAFQCAFG LHRAGMSWIP MNPKNGEDDA RYTLDMFECD LLVFHSRFAD MVRAIRPQLP
RIAAYVCLDR RIGDIPSLDE WLSGVPDGWT DLPLDNDALA IIMPTGGTTG RPKGVMLTER
NLAAMVATYL FSFVYRTGER PVAMAAAPLT HAAGPLAVPA IARGGAVAIL PAPDIDAMLD
TIEAQRVTEF FLPPTLIYRM LDHPGIGDRN LRSVRYFGYG SAPMSVEKLK RAIRLFGPCL
TQFYGQSEAP ALCTFLAPEE HVDDNGDPAP DRVLSSCGRP TALIELRILD ADDREVPAGE
MGEVCVRGDL VTPGYYRQPE LTAAAIVDGW LHTGDIGFLD GEGRLHVCDR KKDMIISGGL
NIYPQEIEQV IWSHPAVADC AVIGVPDEEW GELVTAVVET IEGQDISADA VLGLCRQRLG
SVKCPKRVDF VDALPRSPNG KVLKRVLRDR YWAAVGRRI
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