| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0718 |
|---|
| Symbol | |
|---|
| ID | 5199480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 794445 |
|---|
| End bp | 795116 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640580262 |
|---|
| Product | reduced coenzyme F420:NADP oxidoreductase |
|---|
| Protein accession | YP_001261223 |
|---|
| Protein GI | 148553641 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
|---|
| TIGRFAM ID | [TIGR01915] NADPH-dependent F420 reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00479373 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA CCCAGACCAT CGCCGTGATC GGCGGCACCG GCAAGCTCGG CGCGGCGCTC
GCCCGCCGCC TGGCGCGCGC CGGGGCCGTC GTGACGCTCG GCTCGCGCGA TCCCGACCGC
GCCCGCGCCG CCGCCGAGGA GCTCGGCCAC GGCATCGCGG CGGCCGGCTA TGCGGAGGCG
GCGGCGGGCG CGGACCTGGT GATCGTCGCG GTCCCCTTCG CCGCGCAGGA GGGCGCGCTC
GCCGAGATCG CGCCGCATGT CGCGGGCAAG ATCGTCGTCG ACACGACGGT GCCGCTCGTC
CCGCCCAAGG TGATGCGCGT GTCGCTTCCC GCCGAAGGCA GCGCCGCCGT CCGCGCCGCG
CAGCTTCTCG GCGAAGGCGT CACCGTCGTT TCCGGCTTCC ACAACGTCGC CGCGCACAAG
CTCGCGACCG ACGAGGATAT CGGCTGCGAC GTGCTGGTGT TCGGGGACGA CAAGGCCGCG
CGCGAGCAGG TGGTGGCGCT GGCCGACGCG ATCGGCCTGC GCGGCATCCA TGGCGGCGCG
CTCGCCAATT CCGCGGCGGC CGAGGCGCTG ACCTCGGTCC TGATCTTCCT CAACAAGACC
TATCAGGTCG ACGGCGCCGG CATCCGCATC ACCGGCACGC TGATCGATCC GGCCAGCGGC
AAGGTGCTGT AG
|
|---|
| Protein sequence | MTITQTIAVI GGTGKLGAAL ARRLARAGAV VTLGSRDPDR ARAAAEELGH GIAAAGYAEA
AAGADLVIVA VPFAAQEGAL AEIAPHVAGK IVVDTTVPLV PPKVMRVSLP AEGSAAVRAA
QLLGEGVTVV SGFHNVAAHK LATDEDIGCD VLVFGDDKAA REQVVALADA IGLRGIHGGA
LANSAAAEAL TSVLIFLNKT YQVDGAGIRI TGTLIDPASG KVL
|
|---|
| |