| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0716 |
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| Symbol | |
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| ID | 5199478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 791044 |
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| End bp | 791934 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640580260 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001261221 |
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| Protein GI | 148553639 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00193737 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGCAA AGGCAGGCTT CGACTGGTAT GGGGACCTGC CCGCCGGGGT CGAATGCCTC
ATGCGCTGCT ACAGCGAGTC GCGGCGGTCG GCGAGCTATT TCATCCACCG GCTCGACCGC
GAGACCGCGA CGATCAAGGA TCAGTCCAAC GATCCGGTGA TCAGCCTTTC GATCAACCCC
AACGGCGTCG TCGACCGCGC CGTCGAGGGA CAATGGGAAC GGGCGGAGCT GTTGCGGGCG
TCGCTCACCC TCACCCCCGC CTTCCTGCGC TGCGACTGGC GCTGGACCGG TGATCCGCTC
GACATCTTCG ACGTCTACCT GCCCTATGAG CTGATGCAGG CGGCCTGGGC CGAGCATTTC
AAGGGCGATC CCGCGCGCGT CAACTTGCAG GCCAAGCTGG TCTTCGAGGA CCCGAGCATA
TTGCTGCTGA TGCAGTCGAT CTTGTCGACG ATCCTGTCGC CGCGGCCGAT CTCCGCCTTC
CTGATGGAGA CGATCACCAA TCACCTGATC TCGAGCCTGC TCTGTTCGGA GAACGGCGCG
ATCGTGGTCC GGCCGGCGGC GCGATCGGTG CTGTCGAGCC CGGTGCTGCA ACGGGTGAAG
GACTATGTCG AGGCGCATAT CGCCGAGGAC ATCTCGCTCG ACATGCTGGC GCGCGAGGCG
GGGGTCAGCC GCTTCCACTT CATCCGCCTG TTCAAGGACA GCGTCGGCAT GACCCCGCAT
GCCTATCTGA TCGAGCGGCG CATGGTCCGC GCCTGCAACC TGCTGATGCA TACCAAGCAA
TCAATTGGTG AAATCGCGGT CAATTGCGGA TTCGAGGACC CATCCTATTT CGCTGCGCGT
TTCCGCCGCC TCTACCGGAT GTGCCCACGG GAATTTCGCA AACGGCTATA G
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| Protein sequence | MSAKAGFDWY GDLPAGVECL MRCYSESRRS ASYFIHRLDR ETATIKDQSN DPVISLSINP
NGVVDRAVEG QWERAELLRA SLTLTPAFLR CDWRWTGDPL DIFDVYLPYE LMQAAWAEHF
KGDPARVNLQ AKLVFEDPSI LLLMQSILST ILSPRPISAF LMETITNHLI SSLLCSENGA
IVVRPAARSV LSSPVLQRVK DYVEAHIAED ISLDMLAREA GVSRFHFIRL FKDSVGMTPH
AYLIERRMVR ACNLLMHTKQ SIGEIAVNCG FEDPSYFAAR FRRLYRMCPR EFRKRL
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