| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0706 |
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| Symbol | |
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| ID | 5198179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 773858 |
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| End bp | 776236 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580250 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261211 |
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| Protein GI | 148553629 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00993483 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGCGA GACGCATGAA GCGCGCTTTC CTTGCCACGG CCTCGGCCCT GCTGGTCCTG
CCCGCGGTAC CGGCGCTGGC GCAGGCCGCC GAGCAGGATG CCGGCTATAA TCCGGCGTCG
CTGGGCGACA TCGTCGTGAC CGCCCGCAAG CGCGAGGAGT CGGTGCAGAC CACGCCGCTG
TCGATCTCCG CCTTCGGCGC GCAGGCGTTG CAGGACCGCA ACGTGCAGTC GTCGGCCGAC
ATCGCCAATT TCGTGCCGAA CGTGCAGTTC GACAGCGCGG CGAGCGAGTC CGGCGGCGGC
GCGTCGAGCC AGATCTCGAT CCGCGGCATC GGCCAGACCG ATTATGTCAT CACCGTCGAG
CCGGCGGTCG GCCTCTATCT GGACGGCGTC TATGTCGGCA AGTCGGTCGG CTCGCTGCTC
GACACCGTCG ACATCGAGCG GATCGAGGTG CTGCGCGGGC CGCAGGGCAC GCTGTTCGGC
AAGAACACGA TCGGCGGCGC GATCCAGTTC ATCTCCAAGC GGCCGAGCGA CAAATTCGAG
GCCGAGGCGG AGGCGACGGT CGGCCGCTTC AACCGGGTCG ACGTGAAGGG CATCTTGTCC
GGGCCGCTGT CGGACCGGGT CCGCGCGCGC CTGTCGGGCG CCTATCAGAG CCGCGACGGC
TTCATGGACC GGGTCAGCCC CACCGGCGCC AAGACCGGCG AGCAGGGCAA CATCAACCGG
CTGAGCGGCC GGCTGGTGCT CGAGGCCGAC CTGACCGACA ACCTGCTCGC CACCCTGTCG
TTCGACGGCA CCCGCATCCG CGAGCAGTCG CCGGCCCAGG TGCTGCTCAA GGTGGTCGAG
ACCGACGGCT TCGCCGGCAT CTACAACGGC GCGGTGCCGG GTGGGGTCTG CCTGCCGACG
GCGGGGCCGT CGCGGTTCGG CAATCCCTAT TGCTACAATA GCCAATATGT CCGGCCGATC
GACGGCCGCA CGACCACCAA TTCGGGGCCG AACCAGTCCG ACACCGACAT CAAGGGCGCG
TCGCTGAACC TCGAATGGAA GGGCGACGGC ATCACCCTGA AGTCGATCAC CGCCTATCGC
GACGTCGGCG TCGACGTCGC GCAGGACCTC TACGGGTCGC CCTATTATTA CGGCGGGGTC
GAGCAGCACA TCTCGCAGAA GCAGTTCAGC CAGGAGGTGC AGCTGCTGGG CGACCTGATG
GACTCGCGGC TGCAATATGT CGCCGGCCTG TTCTACATGC ACGAGAGCGG CACGCAGGTC
TTCCCGGTCA ACCTGCCGCT GGTGCAGTTC GATTCGGGCG GCAAGATCAA GAATGACAGC
TATGCCGCCT TCGGCCAGAT CACCTACGAC CTGACCGACC AGTTCTCGAT CACCGGCGGC
CTGCGCTACA CTTACGAGCG CAAGCAGTTC AATCCGGGGC TGCAGGTGAT CACCGGCTAC
GACTATCTGT CGACCATCCC GACGCCGGGC GTGACCAATC CGATCGTCGA CCTGTTCGGC
CCGGTCGGCA CGCCGCTGTT CCCGGCGGGC TGGTACAAGC GGACCAGCAA GTCGGCGACG
CCGATGGTGT CGCTCAGCTA CAAGTTCGAC CGCGGCACCA TGGCCTATGC GACCTTCTCG
CAGGGGTTCA AGGCGGGCGG CTTCACGATG CGCTACTTCC CGCCGGTCAT TCCCGCGCCC
GGCACCGATC CCGACGACAT CGTCTCCTAT GCCGGCCCGG AGAAGGCGAC CTCCTATGAG
ATCGGCCTCA AGACCGAGCT GTTCGACCGC CGCCTGCGCC TCAACGTCGC GGGCTTCTAC
ACCGACTACA AGAACATCCA GGTCACCTAT GTGGTCGACC CGGACGGCCC CGGCCCGATC
GGCCAGTTCG TGCCGGTGCT CGCCAATTCG GGCACCGCGC ACATCAAGGG GATCGAGGTC
GAGGGATCGG CGGTGCTGGC CGACTGGTTC CGCTTCGACG GCAGCTTCGG CTATATCGAC
GCCAAATATG TGAAGTTCAG CGCCGACGCG CTGGCCAACT TCCCCGGCGC GCTGTCGCTG
AAGATCCCGA ACACGTCGAA GTTCACCTAT AATGTCGGCG GCGTCGCGAC CTTCTTCAAC
AACGACCATG GCACGTTGTT CGCGCGCGCC GACTACAGCC GCCGCAGCGG CCAGTACAAG
GAGTTCTCGA ACGATCCGTC GCTCTTCCAG CCGGCCTATG GCGTGCTCGG CGCGTCGGTG
ACCTATCGTT CGCCGACCAA GCGCTGGGAA GTGGCGGCCG GCGGCACCAA CCTGACCAAC
AAGGCCTATA TCGTCAGCGG CGTCACCAGC TCCGAATATT CCCAGGCAGT CCGGTCGCGC
CCGCGCGAAT GGTTCTTGCG TCTGCGCTAC CAGTATTGA
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| Protein sequence | MDARRMKRAF LATASALLVL PAVPALAQAA EQDAGYNPAS LGDIVVTARK REESVQTTPL
SISAFGAQAL QDRNVQSSAD IANFVPNVQF DSAASESGGG ASSQISIRGI GQTDYVITVE
PAVGLYLDGV YVGKSVGSLL DTVDIERIEV LRGPQGTLFG KNTIGGAIQF ISKRPSDKFE
AEAEATVGRF NRVDVKGILS GPLSDRVRAR LSGAYQSRDG FMDRVSPTGA KTGEQGNINR
LSGRLVLEAD LTDNLLATLS FDGTRIREQS PAQVLLKVVE TDGFAGIYNG AVPGGVCLPT
AGPSRFGNPY CYNSQYVRPI DGRTTTNSGP NQSDTDIKGA SLNLEWKGDG ITLKSITAYR
DVGVDVAQDL YGSPYYYGGV EQHISQKQFS QEVQLLGDLM DSRLQYVAGL FYMHESGTQV
FPVNLPLVQF DSGGKIKNDS YAAFGQITYD LTDQFSITGG LRYTYERKQF NPGLQVITGY
DYLSTIPTPG VTNPIVDLFG PVGTPLFPAG WYKRTSKSAT PMVSLSYKFD RGTMAYATFS
QGFKAGGFTM RYFPPVIPAP GTDPDDIVSY AGPEKATSYE IGLKTELFDR RLRLNVAGFY
TDYKNIQVTY VVDPDGPGPI GQFVPVLANS GTAHIKGIEV EGSAVLADWF RFDGSFGYID
AKYVKFSADA LANFPGALSL KIPNTSKFTY NVGGVATFFN NDHGTLFARA DYSRRSGQYK
EFSNDPSLFQ PAYGVLGASV TYRSPTKRWE VAAGGTNLTN KAYIVSGVTS SEYSQAVRSR
PREWFLRLRY QY
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