| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0697 |
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| Symbol | |
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| ID | 5197474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 762871 |
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| End bp | 763662 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580241 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261202 |
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| Protein GI | 148553620 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0659178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTT TCGATGTCCC GTTCGACCAG AAGTCCGTCG CGATCGTGAC GGGCGGCGAA
TCCGGCATCG GCCGCGCCAC CGCGATCCGG CTGGGAGCGG CGGGCGTTCC GGTGGTCCTC
ACCTGGTTCG CCGATCGCGC GGGCGCCGAT GCCGTCGTCT CCGCCATCGT CGACGGCGGC
GGCCGGGCCG GGGCGATCCA GGCCGATGTC GGCGACGAGG CGGCGGTCGA GGCGCTGTTC
GCCTTCGCCG AGCAACGCTT CGGCATCGTC GACCTGCTGG TCAACTCGGC CGGCCTCAAC
ATGTCGGGCG TGATGCTGCC CGACATGGCG CTCGCCCAGT TCGATCGCCT GCTGCGCGCC
GACCTTTACG GCCCGTTCCT GACCTGTCGC CGGATGGTGC GCGCGCTCGA CGGGGCGGGG
CGCGGCGGCC GGATCGTCAA CATCTCCTCG ATCCACGAGT GCGCACCCCG GCCGGGCGGC
GCCGATTACG ACGCCGCCAA GGGCGGCCTG GCGCAGCTTA CTCGGACGCT GGCGCTCGAA
CTGGCGCCGC GGCGCATCGC GGTCAACGGC ATCGCGCCGG GCATGATCCT CACCCCGATG
AACCAGGGCG CGCTCGATCA CCCCGACGAA CTGCGGCGCA AGGAAGCCGC GATCCCCTGG
GGACGCGCCG GCACTCCCGA CGAGGTGGCC GACCTCATCC TGTTCCTGCT GTCGCCGGTC
GCGGACTATA TCACCGGGAC GACGGTGACG ATCGACGGAG CCCTGTCGCT GACCGTGGCG
CAGGGGGCCT GA
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| Protein sequence | MARFDVPFDQ KSVAIVTGGE SGIGRATAIR LGAAGVPVVL TWFADRAGAD AVVSAIVDGG
GRAGAIQADV GDEAAVEALF AFAEQRFGIV DLLVNSAGLN MSGVMLPDMA LAQFDRLLRA
DLYGPFLTCR RMVRALDGAG RGGRIVNISS IHECAPRPGG ADYDAAKGGL AQLTRTLALE
LAPRRIAVNG IAPGMILTPM NQGALDHPDE LRRKEAAIPW GRAGTPDEVA DLILFLLSPV
ADYITGTTVT IDGALSLTVA QGA
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