Gene Swit_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0374 
Symbol 
ID5198913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp397337 
End bp398089 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID640579914 
ProductMarR family transcriptional regulator 
Protein accessionYP_001260883 
Protein GI148553301 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.724626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAA GCCGGACGAC CGCTCCCATG ATCGACGCGT GCCGCGCGGC GCTGGAGGCG 
CATCATGCCC GGCACGGCAC GATCCCGTCG ATGGCGGGGC TCGCCAAACT CTGGGGCTAT
GCCAGCAAGT CGTCGGCCGC GCGGCGGGTC GGCGAACTGG TCGAGGCCGG AGTACTGGCC
TGGTCGGCGG ACCGCAGGCT GCGGCCGGGG CCCGCTTTCC ATTCCGGCCA TCCCCCGTCG
CCGATGCCCG ACCCCGGCCT CGATGAAGCG AGGGAGCGCT GGTCGACCGG CTATGACGGC
GAGTTGACCC GCGCCTATAT GATGACGGTG CGGCTGCTGC GGCTCGCGCG CAGCATCGAG
ATCGGCCTCG CCCGGACGGC GGCCAGCGAG GGGCTGACGG CGGGCGAGGT GCTGGTGCTC
GACACGCTGT TCCGCGCTGG GCCGCCGCAT CGGCTCGCGC CCACCGCGCT CAAGAAGCAT
TTCGTCATCT CGCTCGCCGG CGTCGCCAAG CGGCTCGAAC GGCTGCTCGC GCTCGGCCTG
ATCGAGCGGG TGCCCAATCC CGACGACCGG CGCGGCATGC TCGTCCAGCT CACCGCGAGC
GGCATCGCGC TGCTCCAGCG TCTCGTCCAG CTCGATCGCC ACTCGTCCCA CATCATGTGG
CCGACAGCGC TGCCCGAGCA GGACTATCGG GTGATGCTCG ATGCCCTACA GGCCGCCCAG
GCGTTGATCG AGGCGGAATC GGATGATTTA TAA
 
Protein sequence
MARSRTTAPM IDACRAALEA HHARHGTIPS MAGLAKLWGY ASKSSAARRV GELVEAGVLA 
WSADRRLRPG PAFHSGHPPS PMPDPGLDEA RERWSTGYDG ELTRAYMMTV RLLRLARSIE
IGLARTAASE GLTAGEVLVL DTLFRAGPPH RLAPTALKKH FVISLAGVAK RLERLLALGL
IERVPNPDDR RGMLVQLTAS GIALLQRLVQ LDRHSSHIMW PTALPEQDYR VMLDALQAAQ
ALIEAESDDL