Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0334 |
Symbol | |
ID | 5200966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 356443 |
End bp | 357327 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640579874 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001260843 |
Protein GI | 148553261 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0588577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGC TCGACTTCAC CGGCCGCACG GCGATCGTCA CCGGCGCCGC CAAGGGCCTC GGCCGCGCCT ATGCCCGCTG GCTCGCCGCG CGCGGCTGCG CGGTGGTCGC CAGCAACCGG CCGGCGGCGG ACGGCGGCTC GGCGGCGCAG GCGACCGTGG ACGAGATCGT CGCGGCCGGC GGCCGCGCGG TGGCGCATGA CGGGCCGGTC GAATCCGAGG CGGCGGCGGC CGAGCTGGCC GATCTCGCGC TCAGCCGCTT CGGCGGGATC GACATCCTCG TCAGCAATGC GGGGGTGGTG CGCTGGGGCG AATTCGGCGC AGTCACCGCC GACGATATGC GCGAGGTGAT CGACATCAAC CTGTGGGGCT GCATCCATGG GCTGAAGGCG GCGTGGCCGG CGATGACGGC GCGCGGCTAT GGCCGGATCG TCCTCACCGC GTCGAGCGCG GGGCTGTGGG GCCAGATGCG CTCGCCCGCC TATGGCGCCT CGAAGGCGGC GATGATCGGC CTCGCCCGCT CGATCGCGCT CGACGTGCCC GAGGGCGCCG ATATCCGGAT CAACGTGATC GCGCCCGCCG CCTATACGCC GATGTCGGCG GCGCATTTCG ACGAGAAATG GGCCGATTAC GCCTCGGCCG ACCGGGTCGC CCCGGTGGTC GGCTGGCTGG CGAGCGATCG CTGCGGCAGC TCGGGCGGCA TCTATCATGC CGGCGCCGGC CATGTCCGCC GCGTCCAGAT CCTCGAAGGG CCGATCGAGG AACTGTCGAG CGGCCCGATC GACGAGGTGA TGGCGCGATT GGAGCCCAAG CCCGAATGGA CCAGCTCCTT CGCCTCGGGC GCCGAGCTGA TGCCCGAGCT GGCCAACGCG GCGAACGGCT CATGA
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Protein sequence | MAELDFTGRT AIVTGAAKGL GRAYARWLAA RGCAVVASNR PAADGGSAAQ ATVDEIVAAG GRAVAHDGPV ESEAAAAELA DLALSRFGGI DILVSNAGVV RWGEFGAVTA DDMREVIDIN LWGCIHGLKA AWPAMTARGY GRIVLTASSA GLWGQMRSPA YGASKAAMIG LARSIALDVP EGADIRINVI APAAYTPMSA AHFDEKWADY ASADRVAPVV GWLASDRCGS SGGIYHAGAG HVRRVQILEG PIEELSSGPI DEVMARLEPK PEWTSSFASG AELMPELANA ANGS
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