| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0310 |
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| Symbol | |
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| ID | 5200922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 327507 |
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| End bp | 329108 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579850 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001260819 |
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| Protein GI | 148553237 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.280778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACG CGGCGAGCCC GCATTTCTCC GGGCTGACCA TCTCGCTCGA TCACACGCTG
CCCGCGCTGA TCGCCCATGT CGCCGAGACC TATGGCGACA CGCCCTTCGT CGTCGGCGAG
GACGGCCGGG CGACGAGCTT CGCGGCGTTC CGGGACCGGG CGGACCGGCT CGCGGCGGCG
CTGGTGGCGC ATGGCGTCGC ATATGGCGAC CGGGTGGCGA TCTGGGCGCC CAACAGCCCC
GAATGGATGG TCGCGGCCTC GGCGATCGAG AGCATCGGCG CGATCATGGT GCCGATCAAC
ACCCGCTTCA AGGGCGCCGA GGCGCTCTAC GCGCTCGGCA AGACGCGGGC GCGCGTCCTG
TTCACCGTCG CAGGCTTCCT GGGCAACGAC TATGCCGCGA TGCTGCGCCA GGCCGGCGGC
GGCGCGGGCG TCGTCCATCC GGTCGCCGCG CTGCCGAACC TGCGCGAGAT CATATTGCTC
GACGACGCCT CGCTCGCGGC GTTCGAGGCC GACCGGTGCA GCGACGCCGA GTTGGCGGCG
CGCATCGCCG GGGTCCGTTC CGACAGCATC GCCGACATAT TGTTCACCAG CGGCACCACC
GGCTTCCCCA AGGGGGCGAT GCACGATCAC GGCCAGGCGC TGTGGATGGT CGCCAACTGG
AACCGCTCGA ACGACCTGCG CGCGGGCGAT AGGGCGCTGA TCGTCAACCC CTTCTTCCAC
AGCTTCGGCT ACCGGTCGGG CTGGGTGTCG GGGCTGGTCG CGGGGATGAC CGTCTTCCCG
GTCGCCAGCT TCGATCCCGA AGCCGTGCTC AAGCTGATCG AGCGCGAGCG GATCAGCGTG
CTGATGGGGC CGCCGACCAT CTTCACCACG CTGATGGAGC ATCCGCGCTT CGGCGCCTAC
GACATCTCCT CGCTGCGCGT CGGCCATACC GGCGCGGCCA ATGTCCCGGT CGACCTGATC
CGGGCGGGAC GCGAGGTGTT CGGCTTCGAC CTGTTCCTGA CCAGCTTCGG GCAGACCGAG
ACGACCGCGC TGGTGACGGT CAACTATCCC GACAGCGATT TCGAGACGAT CGCCCGGACG
GTCGGCGTGC CGCTGCCCGG CGTCGAGGTG CGGATCGCCG AGGAGAGCGG CGAGCTGCTG
GTGCGCGGCC CCAACGTCAT GCGGGGCTAT TTCGAGGACC CCGAGCAGAC CGCCGCGACG
ATCGACGCCG AGGGCTGGCT CCACACCGGC GACGTCGCCT GCCTGAACGC GGACGGCACG
GTCCGCATTC TCGACCGGCT CAAGGACGTC GTCATCGTCG GCGGGTTCAA CGCCTATCCG
GCCGAGATCG AGCATGTCCT GCGCGCGCAT CCGGCGGTCG CCGACGTCTG CGTGATCGGC
TGGCCCGACG ATCGGATGGG CGAGGTCTGC GCCGCCTGCG TGATCCCGCG CCCCGGCGCC
GCGCTGTCGC TCGCCGAGCT GACCGCCTGG AGCCGCGAGC GGATGGCCAA TTACAAGGTG
CCGCGCCACC TGTTCCTGGT CGAGGACTTC CCTCGCACGC CGCTGGGCAA GATCCAGAAA
TTCGTGCTGC GCGATCAGCT CGGGGATGCC GTCCCGGCCT GA
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| Protein sequence | MDDAASPHFS GLTISLDHTL PALIAHVAET YGDTPFVVGE DGRATSFAAF RDRADRLAAA
LVAHGVAYGD RVAIWAPNSP EWMVAASAIE SIGAIMVPIN TRFKGAEALY ALGKTRARVL
FTVAGFLGND YAAMLRQAGG GAGVVHPVAA LPNLREIILL DDASLAAFEA DRCSDAELAA
RIAGVRSDSI ADILFTSGTT GFPKGAMHDH GQALWMVANW NRSNDLRAGD RALIVNPFFH
SFGYRSGWVS GLVAGMTVFP VASFDPEAVL KLIERERISV LMGPPTIFTT LMEHPRFGAY
DISSLRVGHT GAANVPVDLI RAGREVFGFD LFLTSFGQTE TTALVTVNYP DSDFETIART
VGVPLPGVEV RIAEESGELL VRGPNVMRGY FEDPEQTAAT IDAEGWLHTG DVACLNADGT
VRILDRLKDV VIVGGFNAYP AEIEHVLRAH PAVADVCVIG WPDDRMGEVC AACVIPRPGA
ALSLAELTAW SRERMANYKV PRHLFLVEDF PRTPLGKIQK FVLRDQLGDA VPA
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