| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0282 |
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| Symbol | |
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| ID | 5196958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 298877 |
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| End bp | 300355 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579822 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001260791 |
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| Protein GI | 148553209 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.376129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.234171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG TCGTCATCGT CGGCGACCGC GTCCGCACCC GCGACGAGGC GATCGAGCGC
GGCGCGCGGC TCGCGGCGGC GATGCATGCG GCGGGGGTGG AAGCGGGCGA CGCGGTCGCG
CTGCTGCTCC GCAACGACTT CGCGGTGCTG GAGGCCAATC TCGCGGTGCG GCGGCTCGAC
GCCTATGGCG TGCCGGTCAA CTGGCACTGG CATGCCGACG AGATCGGCTA TGTCCTGCGC
GATTGCGCGC CGCGGCTGCT GATCGGCCAC CGCGACCTGC TGGAGGCGAT CGAGGACCGT
ATCCCGGCCG GGCTGACCGT CGTCGCGATC GGCGGCGATC CGGCGCGGGG CTGGATCGAC
TATGACGGCT GGATCGCCGG CCATGAGCCG CATGCCGGCA CCGGCACCGG CCTGGGATCG
TCGATGGTCT ATACCTCGGG GACGACCGGG CGGCCCAAGG CGGTTCGGCG CCTGCCCGCC
TCGGGCGAGG AATCGGCGCA GCGCGCGCGG GTGCTGGCGG CGATCCACGA CAGCGCGCCC
GGCAATGTCG CGCTGGTTAC CGGGCCGCTC TACCATCTGT TCGGCCAGGC GCTGATGACC
GCCACCTTCG GTGCGGGCGG ATCGGTGGTG ATCATGGAGC GCTTCGATCC GGAAGCCTGC
CTGGCGCTGA TCGAGCGCCA CCGCGTCACC CACAGCGCGC TGGTGCCGAC TTTGTTCGTC
CGGCTGCTGC GCCTGCCCGA CGCGGTGAAG GCCCGCTACG ACCTGTCGAG CCTGCGTCAC
GTCGTCCATT CGGGGGCGCC CTGCGCGCCC GAGGTGAAGC GGGCGATGCT CGGCTGGTGG
GGGCCGGTGC TGCACGAGAC CTATGGATCG ACCGAGACCG GCGTCGTCAC CAAGATCGGC
CCCGCCGAAT GGCTCGAACG TCCGGGCAGC GTCGGCCGCC CGGTGCTGAC CGGCGAGGTG
CGCATCCGCG GCGAGGACGG CGGCTGGGCG CCGGCGGGCA CGGTCGGCGA CGTCTATCTG
CGCATCCACG GCACCCCCGA CTTCACCTTC CACGGCGATC CCGCCAAGCG CGCGGCGGTC
GAGCATGACG GGCTGGTCAC CTGCGGCGAC ATCGGCTGGC TCGACGCGCA GGGCTATCTC
TTCCTGTGCG ATCGCCGCGT CGACATGCTG ATCTCGGGCG GGGTCAACAT CTACCCGGCC
GAGATCGAGG CGGCGCTGCT CGAACATCGG GCGATCGGCG ACTGCGCGGT ATTCGGCGTC
CCCGACCCCG AATATGGCGA GGCGCCGGTC GCCTATGTCC AGCCCGCCAG CGCGATCGAC
GCCGGGGCGG TGCGCGCCTT CCTGCGCGGC CGGCTCGCGG GCTACAAGGT GCCGCGCCAC
ATCGTCCTCA CCGATGCGCT GCCGCGCGAG GAGACCGGCA AGATCATGAA GCGCAAGCTG
CGCGAGCAAT TCCTGGCGGC GGAGCGCGTC GATGGCTGA
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| Protein sequence | MTPVVIVGDR VRTRDEAIER GARLAAAMHA AGVEAGDAVA LLLRNDFAVL EANLAVRRLD
AYGVPVNWHW HADEIGYVLR DCAPRLLIGH RDLLEAIEDR IPAGLTVVAI GGDPARGWID
YDGWIAGHEP HAGTGTGLGS SMVYTSGTTG RPKAVRRLPA SGEESAQRAR VLAAIHDSAP
GNVALVTGPL YHLFGQALMT ATFGAGGSVV IMERFDPEAC LALIERHRVT HSALVPTLFV
RLLRLPDAVK ARYDLSSLRH VVHSGAPCAP EVKRAMLGWW GPVLHETYGS TETGVVTKIG
PAEWLERPGS VGRPVLTGEV RIRGEDGGWA PAGTVGDVYL RIHGTPDFTF HGDPAKRAAV
EHDGLVTCGD IGWLDAQGYL FLCDRRVDML ISGGVNIYPA EIEAALLEHR AIGDCAVFGV
PDPEYGEAPV AYVQPASAID AGAVRAFLRG RLAGYKVPRH IVLTDALPRE ETGKIMKRKL
REQFLAAERV DG
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