| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0196 |
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| Symbol | |
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| ID | 5196915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 187508 |
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| End bp | 191011 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579735 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001260705 |
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| Protein GI | 148553123 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.037499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCAC GACTAGAGGA CATCAAGAAC GGCGCATCGG TTCGCGGTAT CGGGTCCGCG
CAGCCGGTTC AGGTCGTGTC GGTCGACTGG ATCGGCGACC AGGCGATCAA CGTCGTCTAC
CGCGACCATA ATGGCGTGGT CGCCGAGGCC GTTCTCTACC GGGACGATGA GCACCAGCTC
GCCGTCGAGC AGGCTGGGCG TCCTTGGTCG TTCGATGCTG ACGGTGCGTT GCTGCGCCTG
GTGACCGAGG CCAACCGCAT CAAACTGGCG CATTATTTCG ACCCCTATCT CGCGATCCAC
ACGAGCCTTG TTGATCCGTT GCCGCACCAG ATTTCGGCGG TCTATGGCGA GATGCTTCCG
CGCCAGCCGT TGCGCTTCCT CCTCGCCGAC GATCCCGGCG CCGGCAAGAC GATCATGGCC
GGTCTGCTCA TGAAGGAGCT GATCGCGCGC AGCGATCTCG AGCGCTGCCT GGTGGTTGCA
CCTGGCAGCT TGGTCGAGCA GTGGCAGGAT GAGCTCGGTC AGAAGTTCAA TCTCGAGTTC
GACATCCTCA CGCGAGACAT GATCGAGACC TCGCGCTCGG GCAATCCGTT CAGTGATCGG
GACCGGTTGA TCGTCCGCCT CGACGTGCTG GCGCGCAACG AAGAGCTGCA GGAAAAGCTC
ATGAGTGCGC GCGAATGGGA CCTCATCATC TGCGACGAAG CGCACCGGAT GTCGGCGACC
TATTTCGGCG GTGAGGTCAA ATATACCCGG CGCTATCAGG TCGGTCAGAA GCTCGGCCAA
GTCTGCCGCC ACCTGCTCTT GATGTCGGCG ACGCCGCACA ACGGCAAGGA AGAGGACTTC
CAGCTGTTCA TGGCGCTGCT CGACGGCGAC CGCTTTGAGG GGCGGTTCCG CGACGGCGTC
CATTATGCCG ACACCGCCGA CATGATGCGG CGGCTGACCA AGGAGGAGCT GCTCAAGTTC
GATGGCCGGC CGCTGTTCCC CGAACGGCGC GCCTACACCG TGAAATATGA GCTCTCCGAG
GGCGAAGCCG CGCTCTACAC TGCGGTCACC GACTATGTGC GCACCGAGAT GAACCGAGTG
CAGCGTTTTG CCGAAGGTGA CGGCAAGAAA CGCAACAATG TCGGCTTCGC GTTGCAGATC
CTCCAGCGCC GACTCGCCTC ATCTCCGGCC GCCATCTATC AATCGCTGAA GCGCCGCCGC
GAGCGGTTGG AGAACGAGCT GGGCGAAGCG CGCCTTGCCA CGAGAGGGCG TCGCACGGGG
ATCGACGAGC CGTCGGTCGG CCCCGACGTG CTGCGCAATA TCGAGGAATA TGGCCAGGAC
GAGATCGACG AACTCGAGGA GCTGATCTCA ACCGGCGCGA CGACGGCCGA GACTGTCGAG
CAGCTCGCCC TTGAAGTCGA AACGCTGAAG GGTCTGGAAG CAATGGCGCT TGGTGTGTTG
CGCTCGGGCG TCGACACCAA ATGGAGTCAG CTCAACCGCA TTCTCGACGA CGATCTGATG
GTCGATGCGG CCGGGAATCG TCGCAAGCTG ATCATTTTTA CCGAGCCCAA GGACACGCTC
CACTACCTGC TCGACAAGGT GCGCGCGCGC CTCGGTAACG CCGAGGCGGT CGATGTGATT
CATGGCGGCG TGTCGCGCGA GGAACGCCGC AAGGTGATCG AGCGCTTCAT GCAGGACAAG
GACCTGCTCG TACTGATCGC CAACGACGCC GCCGGCGAAG GCGTCAATCT TCAGCGCGGG
CATCTGATGG TCAATTACGA CCTCCCCTGG AATCCCAACA AGCTTGAGCA GCGTTTCGGT
CGCATTCATC GCATCGGTCA GACCGAGGTG TGCCACCTTT GGAACCTGGT CGCGGCCGAC
ACTCGCGAGG GTGAGGTCTA TGCGCGTCTC CTCGAAAAGC TAGAGGCCGC GCGCGAGGCG
CTAGGCGGCC GCGTCTACGA CGTGCTCGGC GAGTTGTTTG AGGGCATAGC GCTCAAGGAC
CTGCTCTTCC AAGCGATCCA GTATGGCGAG CAGGATGAGG TGAAGGCGCG GCTGTTCCGG
CAAGTTGACG GGGCTGTCGA TCAGGGTCAC TTGCTCGAAT TGCTCCGGCG CCGGGCCCTC
ACCAACGACA CCATGCCCGA AGCCAAGGTC GAAGAACTCC GGCTCGAAAT GGAGCGAGCC
GAGGCACTGC GCCTGCAGCC GCACCATATC CAGAGCTTCT TCGTCGAGGC GTTCCAGCAT
CTGGGCGGGC GCCTCAAGCG CCGCGAGGAA GGGCGCTGGG AAATCACGCA TGTGCCAGTG
CGCATCCGCG AGCGCGACCG GCAGATCGGC ACCGGCGCGC CGCTTCAGAA GCAATATGAG
CGGATCTGCT TCGAGAAGGG TCTGATCCAC CAGCAGCCGG TCGCCGCGTT TGTTTGTCCC
GGCCACCCGC TGCTCGAGGC CGTGATCAGC CTTATCCGCG AGCAATACGA GCAGATCATG
CGCCAGGGCG CGATTCTCGT CGACGATACC GATGCCGGCG ACGCTCTCTC GGCGATCTTC
CTCTTGGAGC ACATAGTCCA GGACGGCCGC GCGACGAGCG CCGGCAAGCC ACACGTGATT
TCGCAGCGAC TCCAGTTCGC CGCGATCGAC AAAGCCGGCG ATGCCCGCAA CGCGGGCATC
GCGCCGCACC TTAACCTGCG GCCCGCAACG GCCGAAGAAG CCGGCGTCGT GCGCGATCTG
CTCGATGAGG ACTGGCTGAC CAGCGAGCTG GAAAGGACCG CCATCCGCTT CGCCACCGTC
GAGCTGGCGC AAGGGCATGT CGCCGAGGTC AAGGCGCGGC GCCTGCCCGA GATTGAGAAG
GTCGAGCAGG AGGTCCGCGC CCGGCTCAAG AAGGAGATCA ATTATTGGGA CTCACGCGCC
TTCGAGCTCA AGGAGGAAGA GAAGGCCGGC AAGAAGACGC GGCTCAATTG GCAGAATGCC
CAGCGACGCG CCGAGGAACT AGCGGAGCGC CAGAAGCGGC GGATGGACCA GCTCGAACGC
GAGCGGTTCA TCTCGTCACA GCCGCCGCGG GTGCGCGGCG GCATGGTGGT CATCCCGCGC
GGTCTGCTGG AGGCTCGTCA TTCTCCCGCC GTGGCGAACC GTTTCGCCGA GGACCCGGCA
GCGCGGCGAG CGATCGAGCT TGCCGCGATG GAAGCAGTCA TGGCCGCCGA GCGCGCGCTG
GGACACGCGC CGGTCGACGT CTCTGCCCAG AAGATCGGTT ACGATATCGC CTCGCACGAT
CCGAAATCTG GGCATTTGCG CTTCATCGAG GTCAAGGGCC GCATTGACGG GGCGGACTCC
GTGATGATCA CGCGCCAGGA AGTCATTACC TCGCTGCACG AGCCAGAGAA GTTCATTCTG
GCGATCGTGC CCGTCGCTAG CGGCTTTGCG CATGAGCCGC ACTATGTGCG CGGGGCGCTT
GTCGAGCGCG AACCATCGTT CCTCGAGACG GCGATTCAGT TCGACTTGCG GCGTTTGTTG
GCGCGGGCGG AGTCACCGCG ATGA
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| Protein sequence | MGARLEDIKN GASVRGIGSA QPVQVVSVDW IGDQAINVVY RDHNGVVAEA VLYRDDEHQL
AVEQAGRPWS FDADGALLRL VTEANRIKLA HYFDPYLAIH TSLVDPLPHQ ISAVYGEMLP
RQPLRFLLAD DPGAGKTIMA GLLMKELIAR SDLERCLVVA PGSLVEQWQD ELGQKFNLEF
DILTRDMIET SRSGNPFSDR DRLIVRLDVL ARNEELQEKL MSAREWDLII CDEAHRMSAT
YFGGEVKYTR RYQVGQKLGQ VCRHLLLMSA TPHNGKEEDF QLFMALLDGD RFEGRFRDGV
HYADTADMMR RLTKEELLKF DGRPLFPERR AYTVKYELSE GEAALYTAVT DYVRTEMNRV
QRFAEGDGKK RNNVGFALQI LQRRLASSPA AIYQSLKRRR ERLENELGEA RLATRGRRTG
IDEPSVGPDV LRNIEEYGQD EIDELEELIS TGATTAETVE QLALEVETLK GLEAMALGVL
RSGVDTKWSQ LNRILDDDLM VDAAGNRRKL IIFTEPKDTL HYLLDKVRAR LGNAEAVDVI
HGGVSREERR KVIERFMQDK DLLVLIANDA AGEGVNLQRG HLMVNYDLPW NPNKLEQRFG
RIHRIGQTEV CHLWNLVAAD TREGEVYARL LEKLEAAREA LGGRVYDVLG ELFEGIALKD
LLFQAIQYGE QDEVKARLFR QVDGAVDQGH LLELLRRRAL TNDTMPEAKV EELRLEMERA
EALRLQPHHI QSFFVEAFQH LGGRLKRREE GRWEITHVPV RIRERDRQIG TGAPLQKQYE
RICFEKGLIH QQPVAAFVCP GHPLLEAVIS LIREQYEQIM RQGAILVDDT DAGDALSAIF
LLEHIVQDGR ATSAGKPHVI SQRLQFAAID KAGDARNAGI APHLNLRPAT AEEAGVVRDL
LDEDWLTSEL ERTAIRFATV ELAQGHVAEV KARRLPEIEK VEQEVRARLK KEINYWDSRA
FELKEEEKAG KKTRLNWQNA QRRAEELAER QKRRMDQLER ERFISSQPPR VRGGMVVIPR
GLLEARHSPA VANRFAEDPA ARRAIELAAM EAVMAAERAL GHAPVDVSAQ KIGYDIASHD
PKSGHLRFIE VKGRIDGADS VMITRQEVIT SLHEPEKFIL AIVPVASGFA HEPHYVRGAL
VEREPSFLET AIQFDLRRLL ARAESPR
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