| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0176 |
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| Symbol | |
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| ID | 5200327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 166438 |
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| End bp | 167058 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579715 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001260685 |
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| Protein GI | 148553103 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.658272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.578435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGG AGATCGCCGA CGGCGCGATT TGGAGCGTGA TCATGGTCCC CTCCCCTAGC
CAGCCAGCGC CCTCGGCCGA CGATACGGCC CGTCCACTCT CCAGCGAGAA CGGGCCGACG
CCTTCGCTAA TCGGGCTCGC AGAACTTCAT CGCGTCCATT CCGCGCGGCT GCTTCGCTTC
TTTGCGCGCC ACGGAGCGCG GCAGGACGCG GCCGATCTCG TTCAGGAAAG TTTTGCCCGG
CTGGCAGGGG CACGGGCAAA AAAACCTGAC ATGGCGCTAG AACGACCAGC AGCCTATCTC
AGCACGATCG CCTCGAACCT GCTTCGGGAC AGGGCCAGGA TCGCGGCGTG TCGTTCGACG
GCCCACCATA TTCCGGTTGA CGAGGTGCCG CTCGCGGGAA ACGATCCCAT CGCCGCACTT
GAGGCGCGCG ATCAACTCGA ACGGGTTCAA GCCACGCTCG CCCGATTATC GCCAAAGACC
CGATCGGTCT TCCTTGCCCA TCGTCGCGAT GGTATAAGCT ACAAGGATAT CGCCAACCGA
GAAGGTTTGA GTGAAAAAGC AGTCCAGCGA CGCATGTCCA AAGCTATCGC ACACATTAAA
CGCGCAGGAA GAGTTTACTG A
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| Protein sequence | MPPEIADGAI WSVIMVPSPS QPAPSADDTA RPLSSENGPT PSLIGLAELH RVHSARLLRF
FARHGARQDA ADLVQESFAR LAGARAKKPD MALERPAAYL STIASNLLRD RARIAACRST
AHHIPVDEVP LAGNDPIAAL EARDQLERVQ ATLARLSPKT RSVFLAHRRD GISYKDIANR
EGLSEKAVQR RMSKAIAHIK RAGRVY
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