Gene Swit_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0135 
Symbol 
ID5199829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp130169 
End bp130543 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content64% 
IMG OID640579674 
Productresponse regulator receiver protein 
Protein accessionYP_001260644 
Protein GI148553062 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTA TATTGCTGGC CGAAGATGAC GATTCGATGC GCGAATATCT GGCGCGCGCG 
CTCGAACGAT CCGGTTATGC CGTCACCAGC GTCGATCGCG GCACCGCCGC GCTGCCGCTG
ATCGAGGCGA ACGGCTTCGA CCTGCTGCTG ACCGACATCG TCATGCCGGA GATGGACGGG
ATCGAGCTGG CGCAACGCGC CAACGTCATC GCCCCCAACA TGCGCGTCAT GTTCATCACC
GGCTTCGCGG CGGTCACGCT GAAGTCGGGC GCGACGCCGC CCGACGCCAA GATATTGTCC
AAGCCCTTCC ACCTGCGCGA CCTGGTCCTC GAGGTCGATC GCATGTTCCA GGTGGGCAGC
GCTTCGGGCC TTTGA
 
Protein sequence
MIRILLAEDD DSMREYLARA LERSGYAVTS VDRGTAALPL IEANGFDLLL TDIVMPEMDG 
IELAQRANVI APNMRVMFIT GFAAVTLKSG ATPPDAKILS KPFHLRDLVL EVDRMFQVGS
ASGL