| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0125 |
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| Symbol | |
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| ID | 5198807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 120900 |
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| End bp | 121586 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579664 |
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| Product | ABC transporter related |
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| Protein accession | YP_001260635 |
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| Protein GI | 148553053 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.207988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAT CCATCATCGA CGCCCGCGCC GTTCGTCTCG CGCTGGGCAA GGGATCGGCG
CGGGTCGATA TCCTCAAGGG CATCGACCTC GCGATCCGGG CGGGCGAGAC GGTGGCGCTG
CTCGGGCCGT CGGGATCGGG CAAGTCGTCG CTGATGGCGG TGCTGTCGGG CCTCGAACGC
GCCGATGAGG GCAACATCGA CATCGCCGGG CTCGACTTCG GCCGGCTCGA CGAGGACGCG
CTCGCCGCCG CGCGGCGCGG GCGGATCGGG ATCATCCTCC AGGCCTTCCA CCTGCTGCCG
ACGATGACCG CGCTGGAGAA TGTCGCGGTG CCGCTCGAAC TGGCCGGCGA GGCCGATGCC
TTCGCCCGCG CCGCCGCCGA GCTGGAGGCG GTCGGCCTCG GCCATCGGCT CGACCATTAT
CCGTCGCAGC TCTCGGGCGG CGAGCAGCAG CGGGTCGCGA TCGCCCGCGC CACCGCGCCG
CGCCCCGCCA TCCTGTTCGC CGACGAACCC ACCGGCAATC TCGACGGCGC CACCGGCGCG
ACGATCATGG ACCTGCTGTT CGACCGCCAG CGCAAGACCG GCGCGACCCT GCTCGTCATC
ACCCATGATC CGGCGCTGGC GGCGCGCTGC GCCCGGATCG TCGAGATGCG CGACGGGGCG
ATCCTTTCCG ACCGGGCGGC CGCGTGA
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| Protein sequence | MTASIIDARA VRLALGKGSA RVDILKGIDL AIRAGETVAL LGPSGSGKSS LMAVLSGLER
ADEGNIDIAG LDFGRLDEDA LAAARRGRIG IILQAFHLLP TMTALENVAV PLELAGEADA
FARAAAELEA VGLGHRLDHY PSQLSGGEQQ RVAIARATAP RPAILFADEP TGNLDGATGA
TIMDLLFDRQ RKTGATLLVI THDPALAARC ARIVEMRDGA ILSDRAAA
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