| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0022 |
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| Symbol | |
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| ID | 5200439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 20611 |
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| End bp | 21504 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579559 |
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| Product | farnesyl-diphosphate synthase |
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| Protein accession | YP_001260533 |
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| Protein GI | 148552951 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCC TTCTCGCTTC CGAGCTCGCG CGCATCGCGC AGGAGATCGA CGCCCGTTTC
GACACGCTGC TGACCCCGCC CGACGACAGT CGCGAGCGCC TCTACGCGGC GATGCGCCAC
GCCGCGATCG GCGGCGGCAA GCGGCTGCGG CCGTTGCTGG CCTGCGCATC GGCGCGGCTG
TTCGCGGTCG ATCCCGAATG CGCGCTGCGC GCCGGCCTCG CGATCGAGGC GATCCACGTC
TACAGCCTGA TCCACGACGA CCTGCCGGCG ATGGACGACG ACGACCTGCG GCGCGGCCGC
CCGACCGTCC ACCGCGCCTA TGACGAGGCG ACCGCGATCC TCGCCGGCGA CGGCTTCCAG
GCGCTCGCCT TCGAGATCGC GGCGTCGGAG GCGACCCATC CCGATCCCTT CGTCCGCAGC
GAGCTGGTCG CGGCGCTGGC GGCCGCGGCA GGCCCGGCCG GCATGGTCGG CGGGCAGGCG
ATGGACATGG CGGCGGAGGC CGGCGGGGAG CATGACCTCG ACGCCATCTC GCGGCTCCAG
CAGCTCAAGA CCGGCGCGCT GATCGGCTTC TCGATCGAGG CCGGCGCGAT TCTCGGCCGG
GTGCCGCCCG AGGGCCGGAC CAAGCTGCGC GCCTATGCCC ATGACCTGGG CCTCGCCTTC
CAGATCGCCG ACGACCTGCT CGACGCCGAG GGTGATCCCG CGGCGATGGG CAAGGCGGCG
GGCAAGGACC ACGCCGCCGG CAAGGCGACC TTCGTCGGCC TGCTCGGCGT CGATCGCGCG
CGGGCGCAGG CGCGGCTGCT GTCGCAGCAG GCGATCGATC ATCTTGGCAA TTTCGGACGC
GAAGCCGATC TGCTACGCGA CATCGCGGCT TATGTGGTCG ATCGCGACCG CTGA
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| Protein sequence | MSALLASELA RIAQEIDARF DTLLTPPDDS RERLYAAMRH AAIGGGKRLR PLLACASARL
FAVDPECALR AGLAIEAIHV YSLIHDDLPA MDDDDLRRGR PTVHRAYDEA TAILAGDGFQ
ALAFEIAASE ATHPDPFVRS ELVAALAAAA GPAGMVGGQA MDMAAEAGGE HDLDAISRLQ
QLKTGALIGF SIEAGAILGR VPPEGRTKLR AYAHDLGLAF QIADDLLDAE GDPAAMGKAA
GKDHAAGKAT FVGLLGVDRA RAQARLLSQQ AIDHLGNFGR EADLLRDIAA YVVDRDR
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