Gene Svir_37480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37480 
Symbol 
ID8389069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4071217 
End bp4071633 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content63% 
IMG OID644977759 
Producthypothetical protein 
Protein accessionYP_003135520 
Protein GI257057688 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.234785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA ACAGCAACTC CACGTCGGAC CTCAACTGGT TGCTGGATGA CATGGTGGAC 
CGCGTAGTCG GCGCCCAGCA CGCCGTGGTG CTGTCCGCTG ACGGTCTGTT GATGGGCAAG
TCGAGCGCAC TGTCCAAAGA CGACTCCGAT CAGCTGTCCG CGATGGCTTC CAGCCTGCAG
AGCCTCGCCA AAGGAGTCAG CCGCCACTTC CAACGAGGCC CGGTACTGCA GACCCTCATC
GAGATGACCG AGGGCTACTT GTTCGTGTCC GCCGCGGGCA CCGGGGCCTG CCTCGCCGTC
CTCGCCGAGG AGTCGGTGGA CGTCGAGATG ATCGCTTACG AAATGAACCG ACTCGTGAAG
CGCGTCGGTG ACTTCATGTC CGCCGCTCCG AGGAACGAGG TGGCCTCAGA AACGTGA
 
Protein sequence
MNDNSNSTSD LNWLLDDMVD RVVGAQHAVV LSADGLLMGK SSALSKDDSD QLSAMASSLQ 
SLAKGVSRHF QRGPVLQTLI EMTEGYLFVS AAGTGACLAV LAEESVDVEM IAYEMNRLVK
RVGDFMSAAP RNEVASET