Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_37280 |
Symbol | |
ID | 8389049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4048709 |
End bp | 4049092 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977740 |
Product | predicted transcriptional regulator |
Protein accession | YP_003135501 |
Protein GI | 257057669 |
COG category | [K] Transcription |
COG ID | [COG3682] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.122249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGTGG CTAGGCTCGG AGAACTGGAG CGCGCGGTGA TGGAGGTGCT CTGGGCGCGC GACGAACCCG TCAGTGTGCG CGCGGTACAT GCCGCTCTGG GTGATCGCGG GCTCGCCTAC ACCACCGTGA TGACAGTGCT GACCCGGTTG GCGGGCAAAG GACTGGTCCG GCGCAGCCGG GAGGGTCGGG CGTGGTTGTA CCGGCCCGCG GCGGCGCGTG AGGCGTACGT CGCGGAGCTG ATGCTCGAGG CCCTGGAGCT CAGCGGGGAC CGCGGTTCGG CGCTGGTGCA CTTCGCGAAG TCGGTGACCA GCGACGAGGC CGACGCGCTG CGACAGGCGC TGCAGCAGGG TCATCAGCCG GAGCAACAGG GTAAGCAGAC GTGA
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Protein sequence | MDVARLGELE RAVMEVLWAR DEPVSVRAVH AALGDRGLAY TTVMTVLTRL AGKGLVRRSR EGRAWLYRPA AAREAYVAEL MLEALELSGD RGSALVHFAK SVTSDEADAL RQALQQGHQP EQQGKQT
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