Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_36900 |
Symbol | |
ID | 8389011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4013151 |
End bp | 4014383 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977702 |
Product | amidohydrolase |
Protein accession | YP_003135466 |
Protein GI | 257057634 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0846344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGGAC CCACCGAATT ACCTTCCCTA CCCGACGCCC GGTTCGCCGG ACTGCTCAAC GAGGCCAAGG CGCTGCAACA GACCACCGTC GCCCTGCGCC GTGCGATCCA CCGCCACCCC GAGGTGGGCC TCCAACTGCC TCGGACCCAG CAGGCGGTGC TCGACGCACT CGACGGATTA CCCGTCGAGA CCACGCTCGG CACCACGACC ACGTCCGTCA CCGCCGTACT GCGCGGGGCC AAACCGGGCC CGGCCGTGCT GCTGCGAGCC GACATGGACG CGCTGCCGAT GCCGGAGGAC ACGGGGTTGG AATTCGCGTC CGAGGTCCCG GGGGTCATGC ACGCGTGCGG CCACGACACC CATGTGGCCA TGCTCGTGGG GGCGGCGCGG TTGCTCGCCG ACCACGTCGA CGAACTCGCC GGTTCGGTCG TCTTCATGTT CCAGCCGGGC GAGGAGGGCC ATCACGGCGC GCGGCACATG ATCCACGAGG GGGTGCTGGA CGCCGCGGGC ATGCGCGTGC AGAAAGCGTT CGCCATCCAC ACGTTCGCCA ATCTGCCCAC CGGCGTCATC GCCACCAAGT CCGGTCCGGT GCTCGCCTCG GAGGACAGCT TCGCGGTCGA GGTGATCGGT AAGGGCGGAC ACGCCTCCAT GCCGCATTCC GCCGTGGACC CGATCCCCGC CGTGGCCGAG ATGGTGACGG CCCTGCAGAG CCGGGTGACG CGGACGGTGG ACGTGTTCGA CCCCGCGGTC GTCACCGTCA CGCGCATCGC GGGCGGCACC ACCGACAACG TGATCCCCGA GTCCGCCGAA CTGGAGGGCA CCATCCGGAC GTTGTCGGAG CACACCCGCA GCTTCCTGCG CACCGAGGTG CCCGACGTCT GCGAGAAGAT CGGCGAGGCG CACGGCTGCC GGGTCGTGGC CGACCTCAGG CCCGGTTTCC CCGTCACCGT CACCGACGAG CTCGAGACCC AACGCGTGCT CGACCTGGCC GCCGAGGTGT TGGGCGCGAC GTATTCCCAG CGCATGTCCC ACCCGATCAT GGGGGCGGAG GACTTCTCCT ACGTCCTGCA GCGGGTGCCG GGAGCGTTCG CCTTCCTCGG TGCGTGCCCA CCCGACCTCG CCCCGGAGGA GGCTCCACCC AACCATTCCA ACCGGGTGCG TTACGACGAG GACGCACTGG CCTACGGCGT CGCCATGTAC GCCGCCTACG CGCTGGACAC GCTGCGCGGC TGA
|
Protein sequence | MTGPTELPSL PDARFAGLLN EAKALQQTTV ALRRAIHRHP EVGLQLPRTQ QAVLDALDGL PVETTLGTTT TSVTAVLRGA KPGPAVLLRA DMDALPMPED TGLEFASEVP GVMHACGHDT HVAMLVGAAR LLADHVDELA GSVVFMFQPG EEGHHGARHM IHEGVLDAAG MRVQKAFAIH TFANLPTGVI ATKSGPVLAS EDSFAVEVIG KGGHASMPHS AVDPIPAVAE MVTALQSRVT RTVDVFDPAV VTVTRIAGGT TDNVIPESAE LEGTIRTLSE HTRSFLRTEV PDVCEKIGEA HGCRVVADLR PGFPVTVTDE LETQRVLDLA AEVLGATYSQ RMSHPIMGAE DFSYVLQRVP GAFAFLGACP PDLAPEEAPP NHSNRVRYDE DALAYGVAMY AAYALDTLRG
|
| |